Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 Y_RNA.230-201ENST00000364348 109 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 RNU4-10P-201ENST00000364383 140 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 SNORD14B-201ENST00000364533 90 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 RNU6-336P-201ENST00000364891 107 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 RNA5SP283-201ENST00000365604 119 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 RNU6-968P-201ENST00000384076 107 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 RNU6-729P-201ENST00000384399 107 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 MIR32-201ENST00000384965 70 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 AC245291.1-201ENST00000419501 328 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGA2P52926 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGA2P52926 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 HIGD1AP3-201ENST00000515857 278 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 SCARNA8-201ENST00000515924 131 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 RNU2-56P-201ENST00000516826 190 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 AC107934.2-201ENST00000518653 310 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGA2P52926 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGA2P52926 AL157871.3-201ENST00000557231 293 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 LARP7P3-201ENST00000579888 337 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 AP001340.1-201ENST00000624405 217 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGA2P52926 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGA2P52926 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGA2P52926 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGA2P52926 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HMGA2P52926 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGA2P52926 AL451142.2-201ENST00000429076 2090 ntBASIC3.18□□□□□ -1.9
HMGA2P52926 UBE2L2-201ENST00000254302 429 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 AC126755.2-208ENST00000327792 462 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 AC138969.1-213ENST00000331436 462 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 Y_RNA.116-201ENST00000363292 103 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 SNORA25.7-201ENST00000364375 127 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 PPIAP31-201ENST00000405422 495 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 RN7SKP111-201ENST00000410349 271 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 RPL31P2-201ENST00000413849 377 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGA2P52926 NDUFB4P7-201ENST00000423198 363 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGA2P52926 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMGA2P52926 AC125238.1-201ENST00000448842 249 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.17□□□□□ -1.9
HMGA2P52926 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGA2P52926 RNU6-1114P-201ENST00000516022 107 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 SNORD33.1-201ENST00000516213 88 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 RNU6-453P-201ENST00000516819 85 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 AC090049.2-201ENST00000550377 109 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 NACAP3-201ENST00000552100 481 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGA2P52926 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGA2P52926 MIR6820-201ENST00000611508 62 ntBASIC3.17□□□□□ -1.9
HMGA2P52926 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGA2P52926 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HMGA2P52926 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGA2P52926 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGA2P52926 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGA2P52926 AC069528.2-201ENST00000624849 1991 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGA2P52926 AL596211.1-201ENST00000569873 2277 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGA2P52926 SNORD9-201ENST00000362566 104 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 Y_RNA.35-201ENST00000362601 101 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 RNU6-905P-201ENST00000384434 107 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 RN7SKP156-201ENST00000410308 342 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 AC016712.1-201ENST00000431088 378 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 AL135790.2-201ENST00000437701 267 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGA2P52926 PPIAP21-201ENST00000464473 501 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 RPL23AP49-201ENST00000492925 468 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 AC107027.2-201ENST00000512197 115 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 AC010265.1-201ENST00000513509 211 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 RN7SKP179-201ENST00000516126 217 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 SNORA64.4-201ENST00000516632 81 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 RNA5SP165-201ENST00000517142 115 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 AC103783.1-201ENST00000520506 373 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 AC021269.2-201ENST00000532318 330 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.16□□□□□ -1.9
HMGA2P52926 MIR4744-201ENST00000581563 82 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 DEFB117-201ENST00000602356 141 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 AC069294.1-201ENST00000608397 350 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGA2P52926 AC048347.1-201ENST00000624621 427 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 U4.7-201ENST00000638126 106 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGA2P52926 OTUD4P1-201ENST00000237841 3067 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGA2P52926 AL356274.2-201ENST00000624379 3752 ntBASIC3.16□□□□□ -1.9
HMGA2P52926 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGA2P52926 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGA2P52926 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.15□□□□□ -1.9
HMGA2P52926 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HMGA2P52926 AF127577.6-201ENST00000623352 2191 ntBASIC3.15□□□□□ -1.9
HMGA2P52926 AC008555.8-201ENST00000623602 2168 ntBASIC3.15□□□□□ -1.9
HMGA2P52926 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMGA2P52926 RNA5SP51-201ENST00000364750 119 ntBASIC3.15□□□□□ -1.91
HMGA2P52926 SNORA26.2-201ENST00000390922 122 ntBASIC3.15□□□□□ -1.91
HMGA2P52926 UBA52P6-201ENST00000399822 382 ntBASIC3.15□□□□□ -1.91
HMGA2P52926 AC126124.2-201ENST00000413542 321 ntBASIC3.15□□□□□ -1.91
HMGA2P52926 CYCSP49-201ENST00000420810 319 ntBASIC3.15□□□□□ -1.91
HMGA2P52926 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms