Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNU6-527P-201ENST00000363425 104 ntBASIC1.62□□□□□ -2.15
RORAP35398 SNORA75-201ENST00000384158 137 ntBASIC1.62□□□□□ -2.15
RORAP35398 SNORD14D-201ENST00000384390 87 ntBASIC1.62□□□□□ -2.15
RORAP35398 MIR544A-201ENST00000384855 91 ntBASIC1.62□□□□□ -2.15
RORAP35398 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.62□□□□□ -2.15
RORAP35398 RNU2-9P-201ENST00000410194 145 ntBASIC1.62□□□□□ -2.15
RORAP35398 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.62□□□□□ -2.15
RORAP35398 EIF4EP2-201ENST00000422816 654 ntBASIC1.62□□□□□ -2.15
RORAP35398 BX510359.4-201ENST00000423750 193 ntBASIC1.62□□□□□ -2.15
RORAP35398 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.62□□□□□ -2.15
RORAP35398 MTND4P32-201ENST00000437189 1237 ntBASIC1.62□□□□□ -2.15
RORAP35398 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.62□□□□□ -2.15
RORAP35398 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.62□□□□□ -2.15
RORAP35398 AC013470.1-201ENST00000453438 462 ntBASIC1.62□□□□□ -2.15
RORAP35398 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.62□□□□□ -2.15
RORAP35398 BET1P1-201ENST00000482276 359 ntBASIC1.62□□□□□ -2.15
RORAP35398 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.62□□□□□ -2.15
RORAP35398 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.62□□□□□ -2.15
RORAP35398 RNU5F-2P-201ENST00000516066 82 ntBASIC1.62□□□□□ -2.15
RORAP35398 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
RORAP35398 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RORAP35398 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.62□□□□□ -2.15
RORAP35398 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.62□□□□□ -2.15
RORAP35398 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.62□□□□□ -2.15
RORAP35398 MTCO3P23-201ENST00000561363 289 ntBASIC1.62□□□□□ -2.15
RORAP35398 AGGF1P4-201ENST00000568249 801 ntBASIC1.62□□□□□ -2.15
RORAP35398 MIR4528-201ENST00000577763 90 ntBASIC1.62□□□□□ -2.15
RORAP35398 AC121247.2-201ENST00000604776 136 ntBASIC1.62□□□□□ -2.15
RORAP35398 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
RORAP35398 AC073114.1-201ENST00000612027 490 ntBASIC1.62□□□□□ -2.15
RORAP35398 AC063943.3-201ENST00000615562 356 ntBASIC1.62□□□□□ -2.15
RORAP35398 MIR1248-201ENST00000629190 106 ntBASIC1.62□□□□□ -2.15
RORAP35398 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
RORAP35398 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.61□□□□□ -2.15
RORAP35398 RNU6-1164P-201ENST00000364428 107 ntBASIC1.61□□□□□ -2.15
RORAP35398 RNU6-336P-201ENST00000364891 107 ntBASIC1.61□□□□□ -2.15
RORAP35398 RNU6-393P-201ENST00000384475 107 ntBASIC1.61□□□□□ -2.15
RORAP35398 RNU6-692P-201ENST00000384496 107 ntBASIC1.61□□□□□ -2.15
RORAP35398 RNU6-606P-201ENST00000384721 111 ntBASIC1.61□□□□□ -2.15
RORAP35398 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
RORAP35398 SNORD70.1-201ENST00000391007 85 ntBASIC1.61□□□□□ -2.15
RORAP35398 RNU11-3P-201ENST00000391111 133 ntBASIC1.61□□□□□ -2.15
RORAP35398 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
RORAP35398 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.61□□□□□ -2.15
RORAP35398 PPP1R2P5-201ENST00000457256 603 ntBASIC1.61□□□□□ -2.15
RORAP35398 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.61□□□□□ -2.15
RORAP35398 PTP4A1P4-201ENST00000512479 322 ntBASIC1.61□□□□□ -2.15
RORAP35398 RNU6-970P-201ENST00000516312 107 ntBASIC1.61□□□□□ -2.15
RORAP35398 AL356057.1-201ENST00000533798 831 ntBASIC1.61□□□□□ -2.15
RORAP35398 AC007834.2-201ENST00000536310 343 ntBASIC1.61□□□□□ -2.15
RORAP35398 SUB1P2-201ENST00000556401 297 ntBASIC1.61□□□□□ -2.15
RORAP35398 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.61□□□□□ -2.15
RORAP35398 MIR3198-2-201ENST00000577868 80 ntBASIC1.61□□□□□ -2.15
RORAP35398 MIR5583-1-201ENST00000580941 59 ntBASIC1.61□□□□□ -2.15
RORAP35398 AC008752.3-201ENST00000588113 712 ntBASIC1.61□□□□□ -2.15
RORAP35398 AC002044.1-201ENST00000606707 158 ntBASIC1.61□□□□□ -2.15
RORAP35398 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RORAP35398 ZNF680P1-201ENST00000436625 1469 ntBASIC1.61□□□□□ -2.15
RORAP35398 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RORAP35398 MIR126-201ENST00000362291 85 ntBASIC1.6□□□□□ -2.15
RORAP35398 RNU6-1222P-201ENST00000384615 107 ntBASIC1.6□□□□□ -2.15
RORAP35398 SNORA67.5-201ENST00000391036 107 ntBASIC1.6□□□□□ -2.15
RORAP35398 BTF3L4P2-201ENST00000392798 346 ntBASIC1.6□□□□□ -2.15
RORAP35398 AC068050.1-201ENST00000394891 380 ntBASIC1.6□□□□□ -2.15
RORAP35398 Y_RNA.597-201ENST00000410463 100 ntBASIC1.6□□□□□ -2.15
RORAP35398 RNU6-1245P-201ENST00000411130 106 ntBASIC1.6□□□□□ -2.15
RORAP35398 SRIP3-201ENST00000413200 219 ntBASIC1.6□□□□□ -2.15
RORAP35398 AL117339.3-201ENST00000418733 162 ntBASIC1.6□□□□□ -2.15
RORAP35398 AL590556.1-201ENST00000423231 483 ntBASIC1.6□□□□□ -2.15
RORAP35398 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.6□□□□□ -2.15
RORAP35398 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.6□□□□□ -2.15
RORAP35398 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.6□□□□□ -2.15
RORAP35398 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.6□□□□□ -2.15
RORAP35398 MTCO2P4-201ENST00000517968 247 ntBASIC1.6□□□□□ -2.15
RORAP35398 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.6□□□□□ -2.15
RORAP35398 AP001893.2-201ENST00000526949 202 ntBASIC1.6□□□□□ -2.15
RORAP35398 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.6□□□□□ -2.15
RORAP35398 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.6□□□□□ -2.15
RORAP35398 AC104581.2-201ENST00000572227 430 ntBASIC1.6□□□□□ -2.15
RORAP35398 AL158063.1-201ENST00000615349 536 ntBASIC1.6□□□□□ -2.15
RORAP35398 uc_338.11-201ENST00000619132 160 ntBASIC1.6□□□□□ -2.15
RORAP35398 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RORAP35398 RNU6-661P-201ENST00000362409 107 ntBASIC1.59□□□□□ -2.15
RORAP35398 RNU4-15P-201ENST00000362613 141 ntBASIC1.59□□□□□ -2.15
RORAP35398 SNORD48-201ENST00000364953 64 ntBASIC1.59□□□□□ -2.15
RORAP35398 U8.10-201ENST00000384260 133 ntBASIC1.59□□□□□ -2.15
RORAP35398 SNORD116-8-201ENST00000384365 95 ntBASIC1.59□□□□□ -2.15
RORAP35398 UBE2V1P4-201ENST00000425374 344 ntBASIC1.59□□□□□ -2.15
RORAP35398 CBX3P6-201ENST00000430257 527 ntBASIC1.59□□□□□ -2.15
RORAP35398 PRPS1P1-201ENST00000445305 876 ntBASIC1.59□□□□□ -2.15
RORAP35398 MTND1P27-201ENST00000451117 902 ntBASIC1.59□□□□□ -2.15
RORAP35398 AC022364.2-201ENST00000457963 554 ntBASIC1.59□□□□□ -2.15
RORAP35398 SCARNA18-201ENST00000459004 134 ntBASIC1.59□□□□□ -2.15
RORAP35398 RN7SKP210-201ENST00000459176 261 ntBASIC1.59□□□□□ -2.15
RORAP35398 ARL2BPP4-201ENST00000506854 471 ntBASIC1.59□□□□□ -2.15
RORAP35398 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.59□□□□□ -2.15
RORAP35398 LRRC34P2-201ENST00000514850 553 ntBASIC1.59□□□□□ -2.15
RORAP35398 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.59□□□□□ -2.15
RORAP35398 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.59□□□□□ -2.15
RORAP35398 AC022880.1-201ENST00000534017 973 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms