Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.23□□□□□ -1.73
GPC1P35052 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GPC1P35052 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.23□□□□□ -1.73
GPC1P35052 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GPC1P35052 RNA5SP502-201ENST00000362694 119 ntBASIC4.23□□□□□ -1.73
GPC1P35052 RNA5SP201-201ENST00000410316 124 ntBASIC4.23□□□□□ -1.73
GPC1P35052 SNORA36B-201ENST00000410438 131 ntBASIC4.23□□□□□ -1.73
GPC1P35052 RNU4-43P-201ENST00000410628 137 ntBASIC4.23□□□□□ -1.73
GPC1P35052 CYCSP48-201ENST00000417124 323 ntBASIC4.23□□□□□ -1.73
GPC1P35052 AL139281.1-201ENST00000422120 335 ntBASIC4.23□□□□□ -1.73
GPC1P35052 Z82209.1-201ENST00000422141 2135 ntBASIC4.23□□□□□ -1.73
GPC1P35052 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.23□□□□□ -1.73
GPC1P35052 AC006466.1-201ENST00000438721 289 ntBASIC4.23□□□□□ -1.73
GPC1P35052 IGKV1-32-201ENST00000519290 311 ntBASIC4.23□□□□□ -1.73
GPC1P35052 MIR5582-201ENST00000579697 68 ntBASIC4.23□□□□□ -1.73
GPC1P35052 AC015813.4-201ENST00000610469 179 ntBASIC4.23□□□□□ -1.73
GPC1P35052 AL138721.1-201ENST00000616756 179 ntBASIC4.23□□□□□ -1.73
GPC1P35052 MIR548AY-201ENST00000617669 107 ntBASIC4.23□□□□□ -1.73
GPC1P35052 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.23□□□□□ -1.73
GPC1P35052 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GPC1P35052 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GPC1P35052 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GPC1P35052 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
GPC1P35052 AC008555.8-201ENST00000623602 2168 ntBASIC4.23□□□□□ -1.73
GPC1P35052 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.23□□□□□ -1.73
GPC1P35052 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
GPC1P35052 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
GPC1P35052 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
GPC1P35052 CPHL1P-201ENST00000461341 3407 ntBASIC4.22□□□□□ -1.73
GPC1P35052 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GPC1P35052 U8.1-201ENST00000362843 134 ntBASIC4.22□□□□□ -1.73
GPC1P35052 RNA5SP443-201ENST00000363083 132 ntBASIC4.22□□□□□ -1.73
GPC1P35052 RNU6-529P-201ENST00000363383 104 ntBASIC4.22□□□□□ -1.73
GPC1P35052 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.22□□□□□ -1.73
GPC1P35052 RNY3P5-201ENST00000384127 102 ntBASIC4.22□□□□□ -1.73
GPC1P35052 SNORD116-21-201ENST00000384507 92 ntBASIC4.22□□□□□ -1.73
GPC1P35052 Y_RNA.630-201ENST00000411370 108 ntBASIC4.22□□□□□ -1.73
GPC1P35052 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.22□□□□□ -1.73
GPC1P35052 AL732292.1-201ENST00000426692 226 ntBASIC4.22□□□□□ -1.73
GPC1P35052 AL162591.2-201ENST00000449634 317 ntBASIC4.22□□□□□ -1.73
GPC1P35052 RN7SL132P-201ENST00000478131 296 ntBASIC4.22□□□□□ -1.73
GPC1P35052 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.22□□□□□ -1.73
GPC1P35052 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.22□□□□□ -1.73
GPC1P35052 AC093331.1-201ENST00000521474 169 ntBASIC4.22□□□□□ -1.73
GPC1P35052 MIR378D2-201ENST00000580636 98 ntBASIC4.22□□□□□ -1.73
GPC1P35052 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.22□□□□□ -1.73
GPC1P35052 ARF4P1-201ENST00000605447 541 ntBASIC4.22□□□□□ -1.73
GPC1P35052 AC099778.2-201ENST00000610904 211 ntBASIC4.22□□□□□ -1.73
GPC1P35052 AC073308.1-201ENST00000623696 305 ntBASIC4.22□□□□□ -1.73
GPC1P35052 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
GPC1P35052 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
GPC1P35052 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
GPC1P35052 NOL8P1-201ENST00000508336 3529 ntBASIC4.22□□□□□ -1.73
GPC1P35052 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
GPC1P35052 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.22□□□□□ -1.73
GPC1P35052 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.22□□□□□ -1.73
GPC1P35052 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
GPC1P35052 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.21□□□□□ -1.73
GPC1P35052 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
GPC1P35052 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
GPC1P35052 RNU1-75P-201ENST00000347264 129 ntBASIC4.21□□□□□ -1.74
GPC1P35052 MIR448-201ENST00000362131 111 ntBASIC4.21□□□□□ -1.74
GPC1P35052 RNA5SP167-201ENST00000365461 116 ntBASIC4.21□□□□□ -1.74
GPC1P35052 RNU6-597P-201ENST00000365620 102 ntBASIC4.21□□□□□ -1.74
GPC1P35052 RNA5SP151-201ENST00000365632 117 ntBASIC4.21□□□□□ -1.74
GPC1P35052 MIR548A3-201ENST00000385297 97 ntBASIC4.21□□□□□ -1.74
GPC1P35052 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.21□□□□□ -1.74
GPC1P35052 RNA5SP397-201ENST00000391323 118 ntBASIC4.21□□□□□ -1.74
GPC1P35052 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.21□□□□□ -1.74
GPC1P35052 AC245047.4-201ENST00000433189 144 ntBASIC4.21□□□□□ -1.74
GPC1P35052 VDAC1P3-201ENST00000434069 851 ntBASIC4.21□□□□□ -1.74
GPC1P35052 AL353748.1-201ENST00000440753 474 ntBASIC4.21□□□□□ -1.74
GPC1P35052 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.21□□□□□ -1.74
GPC1P35052 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.21□□□□□ -1.74
GPC1P35052 RPS4XP2-201ENST00000458402 793 ntBASIC4.21□□□□□ -1.74
GPC1P35052 SRIP1-201ENST00000489235 288 ntBASIC4.21□□□□□ -1.74
GPC1P35052 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.21□□□□□ -1.74
GPC1P35052 Vault.1-201ENST00000516474 102 ntBASIC4.21□□□□□ -1.74
GPC1P35052 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.21□□□□□ -1.74
GPC1P35052 AP001781.1-201ENST00000530977 207 ntBASIC4.21□□□□□ -1.74
GPC1P35052 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.21□□□□□ -1.74
GPC1P35052 AC006133.1-201ENST00000617106 264 ntBASIC4.21□□□□□ -1.74
GPC1P35052 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.21□□□□□ -1.74
GPC1P35052 AC007546.2-201ENST00000623996 360 ntBASIC4.21□□□□□ -1.74
GPC1P35052 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.21□□□□□ -1.74
GPC1P35052 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
GPC1P35052 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
GPC1P35052 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
GPC1P35052 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
GPC1P35052 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
GPC1P35052 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
GPC1P35052 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.2□□□□□ -1.74
GPC1P35052 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.2□□□□□ -1.74
GPC1P35052 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.2□□□□□ -1.74
GPC1P35052 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.2□□□□□ -1.74
GPC1P35052 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
GPC1P35052 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
GPC1P35052 Y_RNA.35-201ENST00000362601 101 ntBASIC4.2□□□□□ -1.74
GPC1P35052 Y_RNA.40-201ENST00000362645 93 ntBASIC4.2□□□□□ -1.74
GPC1P35052 RNA5SP22-201ENST00000365393 109 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms