Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 BNIP3P30-201ENST00000601184 574 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 AL354950.2-201ENST00000617939 290 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 AC024581.2-201ENST00000619986 252 ntBASIC1.75□□□□□ -2.13
HOXA9P31269 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.75□□□□□ -2.13
HOXA9P31269 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.75□□□□□ -2.13
HOXA9P31269 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HOXA9P31269 MIR337-201ENST00000362281 93 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 RNU6-858P-201ENST00000362436 107 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 RNU6-996P-201ENST00000365438 107 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 RNU6-843P-201ENST00000384454 104 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 RNU6-393P-201ENST00000384475 107 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 CALM2P3-201ENST00000400429 449 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXA9P31269 AC097463.2-201ENST00000421074 142 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 RNU7-63P-201ENST00000459054 62 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 RNU7-180P-201ENST00000459240 63 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 MED28P2-201ENST00000475771 317 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.74□□□□□ -2.13
HOXA9P31269 RPL36AP48-201ENST00000485521 314 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 SNORA43.2-201ENST00000516652 128 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 SNORA31.23-201ENST00000517219 133 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXA9P31269 AP004607.1-201ENST00000524456 203 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 AC079598.5-201ENST00000547460 117 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.74□□□□□ -2.13
HOXA9P31269 HIF1AP1-201ENST00000553642 175 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 MTCO3P23-201ENST00000561363 289 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXA9P31269 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.74□□□□□ -2.13
HOXA9P31269 AP001330.5-201ENST00000607176 411 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 AL773524.1-201ENST00000614065 229 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 AL158209.2-201ENST00000619266 216 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 AC124864.2-201ENST00000624736 186 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 OR5AK4P-201ENST00000635912 903 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 MIR6863-201ENST00000636112 90 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 RBBP8P1-201ENST00000449447 1844 ntBASIC1.74□□□□□ -2.13
HOXA9P31269 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HOXA9P31269 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
HOXA9P31269 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HOXA9P31269 Z75746.1-201ENST00000440243 2080 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 Y_RNA.226-201ENST00000364337 114 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 Y_RNA.324-201ENST00000365165 102 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 RNA5SP240-201ENST00000365355 128 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HOXA9P31269 RNU6-1042P-201ENST00000384204 107 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 RNU6-517P-201ENST00000384362 110 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 HMGN2P39-201ENST00000398005 273 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HOXA9P31269 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.73□□□□□ -2.13
HOXA9P31269 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.73□□□□□ -2.13
HOXA9P31269 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.73□□□□□ -2.13
HOXA9P31269 RNU7-95P-201ENST00000459222 64 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 AL163973.1-201ENST00000484753 577 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.73□□□□□ -2.13
HOXA9P31269 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.73□□□□□ -2.13
HOXA9P31269 LRRC34P2-201ENST00000514850 553 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 SMURF2P1-201ENST00000514992 481 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.73□□□□□ -2.13
HOXA9P31269 AP005639.2-201ENST00000527592 928 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 AC104383.1-201ENST00000530297 370 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.73□□□□□ -2.13
HOXA9P31269 HSBP1P1-201ENST00000555205 166 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.73□□□□□ -2.13
HOXA9P31269 AC104581.2-201ENST00000572227 430 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 AC078795.2-201ENST00000602835 1252 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 AC139792.3-201ENST00000623525 224 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 Z69720.2-201ENST00000624755 279 ntBASIC1.73□□□□□ -2.13
HOXA9P31269 Y_RNA.255-201ENST00000364581 97 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 RNU6-622P-201ENST00000384272 103 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 SNORD116-20-201ENST00000384529 92 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 Y_RNA.517-201ENST00000384551 106 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HOXA9P31269 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HOXA9P31269 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.72□□□□□ -2.13
HOXA9P31269 MTCO3P41-201ENST00000414801 328 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 AC074117.2-201ENST00000417130 397 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 PRPS1P1-201ENST00000445305 876 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 PPP1R2P5-201ENST00000457256 603 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 SNRPFP3-201ENST00000457792 225 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXA9P31269 RPL22P13-201ENST00000493291 347 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 AC107401.1-201ENST00000503426 685 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 CCDC34P1-201ENST00000507441 517 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXA9P31269 MTCYBP40-201ENST00000509390 1135 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXA9P31269 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXA9P31269 SNORA40.12-201ENST00000516329 111 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 SNORA25.17-201ENST00000517184 124 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.72□□□□□ -2.13
HOXA9P31269 AL137161.1-201ENST00000532231 390 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 AP003034.1-201ENST00000534621 422 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.72□□□□□ -2.13
HOXA9P31269 SNORD53B-201ENST00000577887 78 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 MIR4424-201ENST00000585257 86 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.72□□□□□ -2.13
HOXA9P31269 AC012507.3-201ENST00000603556 477 ntBASIC1.72□□□□□ -2.13
HOXA9P31269 RNU6-91P-201ENST00000607774 107 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms