Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RPL21P2-201ENST00000440049 481 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.16□□□□□ -1.74
ERCC3P19447 RPL21P10-201ENST00000463521 490 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 RPL31P41-201ENST00000477967 372 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.16□□□□□ -1.74
ERCC3P19447 SNORA40.15-201ENST00000516884 107 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 RNU6-1198P-201ENST00000516904 67 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 MIR2355-201ENST00000517199 87 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 AC093331.1-201ENST00000521474 169 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
ERCC3P19447 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.16□□□□□ -1.74
ERCC3P19447 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.16□□□□□ -1.74
ERCC3P19447 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.16□□□□□ -1.74
ERCC3P19447 AL355297.3-201ENST00000604082 446 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 MAPK10-362ENST00000641864 4484 ntBASIC4.16□□□□□ -1.74
ERCC3P19447 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.16□□□□□ -1.74
ERCC3P19447 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
ERCC3P19447 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.15□□□□□ -1.74
ERCC3P19447 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ERCC3P19447 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
ERCC3P19447 RNU6-1210P-201ENST00000363775 107 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 MIR549A-201ENST00000385268 96 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 DBIP2-201ENST00000419076 262 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 AP000705.1-201ENST00000454567 350 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 AC140059.1-201ENST00000489238 361 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 RNA5SP112-201ENST00000515937 99 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 RNY3P15-201ENST00000516297 97 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 AC109329.1-201ENST00000518744 317 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 AL442163.3-201ENST00000554110 156 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.15□□□□□ -1.75
ERCC3P19447 CYP4A27P-201ENST00000567218 190 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.15□□□□□ -1.75
ERCC3P19447 KLKP1-201ENST00000595979 403 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 7SK.10-201ENST00000621414 298 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 AC090517.3-201ENST00000625170 141 ntBASIC4.15□□□□□ -1.75
ERCC3P19447 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.15□□□□□ -1.75
ERCC3P19447 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.15□□□□□ -1.75
ERCC3P19447 AC091564.4-201ENST00000533934 2194 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ERCC3P19447 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ERCC3P19447 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
ERCC3P19447 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ERCC3P19447 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ERCC3P19447 RNU1-76P-201ENST00000362903 159 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 RNU6-926P-201ENST00000384075 107 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 Y_RNA.551-201ENST00000384661 102 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 Z92545.1-201ENST00000411782 234 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.14□□□□□ -1.75
ERCC3P19447 CYCSP48-201ENST00000417124 323 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.14□□□□□ -1.75
ERCC3P19447 AC073901.1-201ENST00000462471 408 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 AC025518.1-201ENST00000479856 347 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 RN7SKP57-201ENST00000517248 293 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.14□□□□□ -1.75
ERCC3P19447 COX6CP5-201ENST00000527162 228 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 AC079598.5-201ENST00000547460 117 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.14□□□□□ -1.75
ERCC3P19447 AC103810.1-201ENST00000579873 453 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 AC005000.2-201ENST00000605468 310 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 MIR7851-201ENST00000610611 160 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 RNVU1-4-201ENST00000612985 164 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ERCC3P19447 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 MIR7153-201ENST00000637758 57 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 MIR7515-201ENST00000637837 67 ntBASIC4.14□□□□□ -1.75
ERCC3P19447 Y_RNA.27-201ENST00000362540 103 ntBASIC4.13□□□□□ -1.75
ERCC3P19447 SNORA63.7-201ENST00000365579 123 ntBASIC4.13□□□□□ -1.75
ERCC3P19447 U8.10-201ENST00000384260 133 ntBASIC4.13□□□□□ -1.75
ERCC3P19447 SNORA26.3-201ENST00000391119 136 ntBASIC4.13□□□□□ -1.75
ERCC3P19447 CBX3P9-201ENST00000402326 552 ntBASIC4.13□□□□□ -1.75
ERCC3P19447 RNA5SP120-201ENST00000410900 112 ntBASIC4.13□□□□□ -1.75
ERCC3P19447 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.13□□□□□ -1.75
ERCC3P19447 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.13□□□□□ -1.75
ERCC3P19447 RPS15AP7-201ENST00000439294 405 ntBASIC4.13□□□□□ -1.75
ERCC3P19447 AC010655.3-201ENST00000478818 450 ntBASIC4.13□□□□□ -1.75
ERCC3P19447 RNU6-1114P-201ENST00000516022 107 ntBASIC4.13□□□□□ -1.75
ERCC3P19447 SCARNA13-201ENST00000516672 275 ntBASIC4.13□□□□□ -1.75
ERCC3P19447 RNU6-58P-201ENST00000517143 103 ntBASIC4.13□□□□□ -1.75
ERCC3P19447 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.13□□□□□ -1.75
ERCC3P19447 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ERCC3P19447 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ERCC3P19447 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ERCC3P19447 ZNF204P-201ENST00000416749 2397 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 AL079305.1-201ENST00000623159 3008 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 AC058791.1-201ENST00000608412 3198 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 RNU4-35P-201ENST00000362588 141 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 RNU6-713P-201ENST00000384761 107 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 MIR218-1-201ENST00000384999 110 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 HLFP1-201ENST00000402375 499 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 MIR548F4-201ENST00000408515 105 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 AC005326.1-201ENST00000429197 123 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 IPO7P1-201ENST00000442031 636 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC3P19447 AL121594.1-201ENST00000475906 575 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 HSPE1P20-201ENST00000538133 289 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 AC027288.2-201ENST00000553028 243 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 AL021879.1-201ENST00000611756 288 ntBASIC4.12□□□□□ -1.75
ERCC3P19447 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms