Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SEPT14P19-203ENST00000633205 211 ntBASIC1.95□□□□□ -2.1
TOP1P11387 AL512643.1-201ENST00000635735 524 ntBASIC1.95□□□□□ -2.1
TOP1P11387 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TOP1P11387 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.95□□□□□ -2.1
TOP1P11387 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TOP1P11387 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TOP1P11387 RNU1-57P-201ENST00000384491 166 ntBASIC1.94□□□□□ -2.1
TOP1P11387 MIR578-201ENST00000384828 96 ntBASIC1.94□□□□□ -2.1
TOP1P11387 MIR29C-201ENST00000385231 88 ntBASIC1.94□□□□□ -2.1
TOP1P11387 RNU6-550P-201ENST00000391057 101 ntBASIC1.94□□□□□ -2.1
TOP1P11387 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.94□□□□□ -2.1
TOP1P11387 OR6C66P-201ENST00000414917 930 ntBASIC1.94□□□□□ -2.1
TOP1P11387 RPL31P63-201ENST00000422565 375 ntBASIC1.94□□□□□ -2.1
TOP1P11387 MTCYBP8-201ENST00000422855 651 ntBASIC1.94□□□□□ -2.1
TOP1P11387 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.94□□□□□ -2.1
TOP1P11387 AL596276.1-201ENST00000434465 418 ntBASIC1.94□□□□□ -2.1
TOP1P11387 MTND1P34-201ENST00000438556 671 ntBASIC1.94□□□□□ -2.1
TOP1P11387 AC073415.1-201ENST00000449240 153 ntBASIC1.94□□□□□ -2.1
TOP1P11387 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.94□□□□□ -2.1
TOP1P11387 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.94□□□□□ -2.1
TOP1P11387 SRRM1P2-201ENST00000464531 1192 ntBASIC1.94□□□□□ -2.1
TOP1P11387 GMFBP1-201ENST00000467831 427 ntBASIC1.94□□□□□ -2.1
TOP1P11387 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
TOP1P11387 SNORA40.12-201ENST00000516329 111 ntBASIC1.94□□□□□ -2.1
TOP1P11387 Y_RNA.693-201ENST00000516641 110 ntBASIC1.94□□□□□ -2.1
TOP1P11387 RNU6-835P-201ENST00000516974 104 ntBASIC1.94□□□□□ -2.1
TOP1P11387 RNU6-1315P-201ENST00000517187 99 ntBASIC1.94□□□□□ -2.1
TOP1P11387 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.94□□□□□ -2.1
TOP1P11387 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.94□□□□□ -2.1
TOP1P11387 CBX3P4-201ENST00000538909 354 ntBASIC1.94□□□□□ -2.1
TOP1P11387 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.94□□□□□ -2.1
TOP1P11387 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.94□□□□□ -2.1
TOP1P11387 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.94□□□□□ -2.1
TOP1P11387 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.94□□□□□ -2.1
TOP1P11387 DEFB131E-202ENST00000602581 683 ntBASIC1.94□□□□□ -2.1
TOP1P11387 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TOP1P11387 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
TOP1P11387 RNU6-483P-201ENST00000384088 108 ntBASIC1.93□□□□□ -2.1
TOP1P11387 FTH1P15-201ENST00000406984 280 ntBASIC1.93□□□□□ -2.1
TOP1P11387 MIR548F1-201ENST00000408667 84 ntBASIC1.93□□□□□ -2.1
TOP1P11387 RNU6-387P-201ENST00000411331 105 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.93□□□□□ -2.1
TOP1P11387 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.93□□□□□ -2.1
TOP1P11387 AL669831.1-202ENST00000428504 417 ntBASIC1.93□□□□□ -2.1
TOP1P11387 TIMM9P3-201ENST00000428659 274 ntBASIC1.93□□□□□ -2.1
TOP1P11387 MTND1P4-201ENST00000435196 415 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.93□□□□□ -2.1
TOP1P11387 GTF2IP13-201ENST00000438487 386 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AL360271.2-201ENST00000447710 161 ntBASIC1.93□□□□□ -2.1
TOP1P11387 RNU6-261P-201ENST00000459506 102 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AC083798.1-201ENST00000472671 131 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.93□□□□□ -2.1
TOP1P11387 AC011352.1-201ENST00000512300 793 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.93□□□□□ -2.1
TOP1P11387 RNU6-991P-201ENST00000516168 107 ntBASIC1.93□□□□□ -2.1
TOP1P11387 RNU6-314P-201ENST00000516574 104 ntBASIC1.93□□□□□ -2.1
TOP1P11387 Y_RNA.704-201ENST00000516851 102 ntBASIC1.93□□□□□ -2.1
TOP1P11387 IMMP1LP2-201ENST00000552954 492 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.93□□□□□ -2.1
TOP1P11387 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.93□□□□□ -2.1
TOP1P11387 BNIP3P25-201ENST00000596023 559 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.93□□□□□ -2.1
TOP1P11387 AL670379.4-201ENST00000605279 254 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AC008536.2-201ENST00000607284 349 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AC090517.2-201ENST00000614966 680 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AL354950.2-201ENST00000617939 290 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AC068137.3-201ENST00000639191 341 ntBASIC1.93□□□□□ -2.1
TOP1P11387 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.93□□□□□ -2.1
TOP1P11387 AC073869.6-201ENST00000640656 341 ntBASIC1.93□□□□□ -2.1
TOP1P11387 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.92□□□□□ -2.1
TOP1P11387 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
TOP1P11387 RNU6-1010P-201ENST00000362757 107 ntBASIC1.92□□□□□ -2.1
TOP1P11387 RNU6-552P-201ENST00000362869 119 ntBASIC1.92□□□□□ -2.1
TOP1P11387 RNU6-996P-201ENST00000365438 107 ntBASIC1.92□□□□□ -2.1
TOP1P11387 RNU6-116P-201ENST00000384042 109 ntBASIC1.92□□□□□ -2.1
TOP1P11387 MIR181A1-201ENST00000385026 110 ntBASIC1.92□□□□□ -2.1
TOP1P11387 SNORA17.3-201ENST00000391159 129 ntBASIC1.92□□□□□ -2.1
TOP1P11387 Y_RNA.619-201ENST00000410951 90 ntBASIC1.92□□□□□ -2.1
TOP1P11387 ZNF885P-201ENST00000420174 1098 ntBASIC1.92□□□□□ -2.1
TOP1P11387 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.92□□□□□ -2.1
TOP1P11387 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.92□□□□□ -2.1
TOP1P11387 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.92□□□□□ -2.1
TOP1P11387 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.92□□□□□ -2.1
TOP1P11387 AL163973.1-201ENST00000484753 577 ntBASIC1.92□□□□□ -2.1
TOP1P11387 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.92□□□□□ -2.1
TOP1P11387 RNU6-667P-201ENST00000517186 102 ntBASIC1.92□□□□□ -2.1
TOP1P11387 SNORA31.23-201ENST00000517219 133 ntBASIC1.92□□□□□ -2.1
TOP1P11387 AL512360.1-201ENST00000555346 234 ntBASIC1.92□□□□□ -2.1
TOP1P11387 AL157871.3-201ENST00000557231 293 ntBASIC1.92□□□□□ -2.1
TOP1P11387 HMGB1P33-201ENST00000563485 527 ntBASIC1.92□□□□□ -2.1
TOP1P11387 AC093788.1-201ENST00000609356 927 ntBASIC1.92□□□□□ -2.1
TOP1P11387 AC024940.5-201ENST00000622889 474 ntBASIC1.92□□□□□ -2.1
TOP1P11387 MTND4P5-201ENST00000435821 1374 ntBASIC1.92□□□□□ -2.1
TOP1P11387 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.92□□□□□ -2.1
TOP1P11387 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TOP1P11387 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TOP1P11387 MTND4P23-201ENST00000447723 1363 ntBASIC1.91□□□□□ -2.1
TOP1P11387 Y_RNA.6-201ENST00000362350 114 ntBASIC1.91□□□□□ -2.1
TOP1P11387 SNORD3E-201ENST00000362899 217 ntBASIC1.91□□□□□ -2.1
TOP1P11387 RNU6-1085P-201ENST00000363576 107 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms