Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 CENPCP1-201ENST00000533085 2578 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AL354685.2-201ENST00000448218 1447 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.86□□□□□ -2.11
MMP1P03956 RNU6-552P-201ENST00000362869 119 ntBASIC1.86□□□□□ -2.11
MMP1P03956 RNU6-1303P-201ENST00000364841 107 ntBASIC1.86□□□□□ -2.11
MMP1P03956 SNORA25B-201ENST00000365507 128 ntBASIC1.86□□□□□ -2.11
MMP1P03956 RNU6-1127P-201ENST00000384580 107 ntBASIC1.86□□□□□ -2.11
MMP1P03956 RNU6-1179P-201ENST00000384667 107 ntBASIC1.86□□□□□ -2.11
MMP1P03956 MIR10A-201ENST00000385043 110 ntBASIC1.86□□□□□ -2.11
MMP1P03956 RNU6-780P-201ENST00000391030 104 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.86□□□□□ -2.11
MMP1P03956 CYCSP33-201ENST00000414485 327 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC138623.1-201ENST00000418060 216 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.86□□□□□ -2.11
MMP1P03956 AL606489.2-201ENST00000433886 234 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.86□□□□□ -2.11
MMP1P03956 snoU109.2-201ENST00000459316 135 ntBASIC1.86□□□□□ -2.11
MMP1P03956 GMFBP1-201ENST00000467831 427 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC091435.1-201ENST00000505442 584 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC010493.1-201ENST00000513479 292 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC105417.1-201ENST00000514691 285 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC104383.1-201ENST00000530297 370 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.86□□□□□ -2.11
MMP1P03956 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.86□□□□□ -2.11
MMP1P03956 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.86□□□□□ -2.11
MMP1P03956 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.86□□□□□ -2.11
MMP1P03956 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.86□□□□□ -2.11
MMP1P03956 AC233702.2-202ENST00000562547 291 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.86□□□□□ -2.11
MMP1P03956 AC008945.2-201ENST00000606056 604 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC008536.2-201ENST00000607284 349 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AL158209.2-201ENST00000619266 216 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AL359880.1-201ENST00000621879 266 ntBASIC1.86□□□□□ -2.11
MMP1P03956 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.86□□□□□ -2.11
MMP1P03956 AC068137.4-201ENST00000638485 296 ntBASIC1.86□□□□□ -2.11
MMP1P03956 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
MMP1P03956 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MMP1P03956 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.85□□□□□ -2.11
MMP1P03956 MIR186-201ENST00000384988 86 ntBASIC1.85□□□□□ -2.11
MMP1P03956 SNORA16.2-201ENST00000390991 127 ntBASIC1.85□□□□□ -2.11
MMP1P03956 MTCO3P40-201ENST00000392516 676 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AL591034.2-201ENST00000402839 359 ntBASIC1.85□□□□□ -2.11
MMP1P03956 RNU4-46P-201ENST00000410818 138 ntBASIC1.85□□□□□ -2.11
MMP1P03956 RNU6-607P-201ENST00000411283 108 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AL030996.1-201ENST00000411430 235 ntBASIC1.85□□□□□ -2.11
MMP1P03956 CALM1P1-201ENST00000442082 433 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AC012308.1-201ENST00000451232 178 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AC107032.1-201ENST00000485945 480 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AC018868.1-201ENST00000491307 315 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AC107401.1-201ENST00000503426 685 ntBASIC1.85□□□□□ -2.11
MMP1P03956 Y_RNA.655-201ENST00000515919 96 ntBASIC1.85□□□□□ -2.11
MMP1P03956 SNORA40.12-201ENST00000516329 111 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.85□□□□□ -2.11
MMP1P03956 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.85□□□□□ -2.11
MMP1P03956 AP003034.1-201ENST00000534621 422 ntBASIC1.85□□□□□ -2.11
MMP1P03956 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.85□□□□□ -2.11
MMP1P03956 MIR4529-201ENST00000578110 78 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.85□□□□□ -2.11
MMP1P03956 AC007229.1-201ENST00000590455 412 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AC078899.2-201ENST00000595282 212 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
MMP1P03956 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AC015540.1-201ENST00000615828 501 ntBASIC1.85□□□□□ -2.11
MMP1P03956 RMST_4.1-201ENST00000616886 107 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AC139792.3-201ENST00000623525 224 ntBASIC1.85□□□□□ -2.11
MMP1P03956 SCARNA4-202ENST00000625402 129 ntBASIC1.85□□□□□ -2.11
MMP1P03956 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.85□□□□□ -2.11
MMP1P03956 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
MMP1P03956 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.84□□□□□ -2.11
MMP1P03956 RNU1-23P-201ENST00000363361 144 ntBASIC1.84□□□□□ -2.11
MMP1P03956 RNU6-996P-201ENST00000365438 107 ntBASIC1.84□□□□□ -2.11
MMP1P03956 RNU6-622P-201ENST00000384272 103 ntBASIC1.84□□□□□ -2.11
MMP1P03956 RNU6-45P-201ENST00000384471 107 ntBASIC1.84□□□□□ -2.11
MMP1P03956 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
MMP1P03956 HMGN2P39-201ENST00000398005 273 ntBASIC1.84□□□□□ -2.11
MMP1P03956 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.84□□□□□ -2.11
MMP1P03956 RNU2-29P-201ENST00000410423 189 ntBASIC1.84□□□□□ -2.11
MMP1P03956 AP000275.1-201ENST00000411943 390 ntBASIC1.84□□□□□ -2.11
MMP1P03956 AL356379.1-201ENST00000414105 126 ntBASIC1.84□□□□□ -2.11
MMP1P03956 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.84□□□□□ -2.11
MMP1P03956 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.84□□□□□ -2.11
MMP1P03956 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.84□□□□□ -2.11
MMP1P03956 RNU7-63P-201ENST00000459054 62 ntBASIC1.84□□□□□ -2.11
MMP1P03956 RNU7-180P-201ENST00000459240 63 ntBASIC1.84□□□□□ -2.11
MMP1P03956 AL163973.1-201ENST00000484753 577 ntBASIC1.84□□□□□ -2.11
MMP1P03956 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.84□□□□□ -2.11
MMP1P03956 AC019235.1-201ENST00000503847 207 ntBASIC1.84□□□□□ -2.11
MMP1P03956 SNORA4.4-201ENST00000515921 135 ntBASIC1.84□□□□□ -2.11
MMP1P03956 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.84□□□□□ -2.11
MMP1P03956 RNU2-53P-201ENST00000516257 147 ntBASIC1.84□□□□□ -2.11
MMP1P03956 RNU6-720P-201ENST00000516363 108 ntBASIC1.84□□□□□ -2.11
MMP1P03956 RNU6-1178P-201ENST00000516674 107 ntBASIC1.84□□□□□ -2.11
MMP1P03956 AC107953.1-201ENST00000522216 297 ntBASIC1.84□□□□□ -2.11
MMP1P03956 AP001893.2-201ENST00000526949 202 ntBASIC1.84□□□□□ -2.11
MMP1P03956 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.84□□□□□ -2.11
MMP1P03956 IMMP1LP2-201ENST00000552954 492 ntBASIC1.84□□□□□ -2.11
MMP1P03956 HIF1AP1-201ENST00000553642 175 ntBASIC1.84□□□□□ -2.11
MMP1P03956 EIF1P4-201ENST00000572664 335 ntBASIC1.84□□□□□ -2.11
MMP1P03956 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
MMP1P03956 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms