Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.03□□□□□ -2.41
TNFP01375 Y_RNA.30-201ENST00000362572 97 ntBASIC0.02□□□□□ -2.41
TNFP01375 RNA5SP257-201ENST00000363023 116 ntBASIC0.02□□□□□ -2.41
TNFP01375 RNU6-343P-201ENST00000364709 104 ntBASIC0.02□□□□□ -2.41
TNFP01375 RNU6-952P-201ENST00000391164 108 ntBASIC0.02□□□□□ -2.41
TNFP01375 RPL22P18-201ENST00000417197 377 ntBASIC0.02□□□□□ -2.41
TNFP01375 ELOCP9-201ENST00000418624 239 ntBASIC0.02□□□□□ -2.41
TNFP01375 AC123900.1-201ENST00000420390 96 ntBASIC0.02□□□□□ -2.41
TNFP01375 MTND4P24-201ENST00000424002 397 ntBASIC0.02□□□□□ -2.41
TNFP01375 RNFT1P2-201ENST00000443064 757 ntBASIC0.02□□□□□ -2.41
TNFP01375 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.02□□□□□ -2.41
TNFP01375 RNU11-2P-201ENST00000516898 142 ntBASIC0.02□□□□□ -2.41
TNFP01375 SNORA31.19-201ENST00000517079 126 ntBASIC0.02□□□□□ -2.41
TNFP01375 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.02□□□□□ -2.41
TNFP01375 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.02□□□□□ -2.41
TNFP01375 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
TNFP01375 MIR103A1-201ENST00000362165 78 ntBASIC0.01□□□□□ -2.41
TNFP01375 RNU6-1123P-201ENST00000362347 106 ntBASIC0.01□□□□□ -2.41
TNFP01375 SNORA4.2-201ENST00000365313 147 ntBASIC0.01□□□□□ -2.41
TNFP01375 RNU4-45P-201ENST00000365469 141 ntBASIC0.01□□□□□ -2.41
TNFP01375 RNU6-622P-201ENST00000384272 103 ntBASIC0.01□□□□□ -2.41
TNFP01375 RNU6-575P-201ENST00000411326 105 ntBASIC0.01□□□□□ -2.41
TNFP01375 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.01□□□□□ -2.41
TNFP01375 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.01□□□□□ -2.41
TNFP01375 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.01□□□□□ -2.41
TNFP01375 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.01□□□□□ -2.41
TNFP01375 AC005741.1-201ENST00000511094 432 ntBASIC0.01□□□□□ -2.41
TNFP01375 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.01□□□□□ -2.41
TNFP01375 RNU6-863P-201ENST00000515989 104 ntBASIC0.01□□□□□ -2.41
TNFP01375 RNU6-143P-201ENST00000516942 93 ntBASIC0.01□□□□□ -2.41
TNFP01375 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
TNFP01375 EIF1AXP2-201ENST00000555940 413 ntBASIC0.01□□□□□ -2.41
TNFP01375 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.01□□□□□ -2.41
TNFP01375 MIR5190-201ENST00000581537 80 ntBASIC0.01□□□□□ -2.41
TNFP01375 AL031667.3-201ENST00000620124 655 ntBASIC0.01□□□□□ -2.41
TNFP01375 AL356094.1-201ENST00000624663 1212 ntBASIC0.01□□□□□ -2.41
TNFP01375 SNRPEP3-201ENST00000338402 276 ntBASIC0□□□□□ -2.41
TNFP01375 RNU6-862P-201ENST00000362804 105 ntBASIC0□□□□□ -2.41
TNFP01375 SNORD3E-201ENST00000362899 217 ntBASIC0□□□□□ -2.41
TNFP01375 SNORD56.4-201ENST00000363883 71 ntBASIC0□□□□□ -2.41
TNFP01375 RNU6-1207P-201ENST00000384343 107 ntBASIC0□□□□□ -2.41
TNFP01375 RNU6-950P-201ENST00000384651 107 ntBASIC0□□□□□ -2.41
TNFP01375 SNORD89-201ENST00000390981 114 ntBASIC0□□□□□ -2.41
TNFP01375 SNORD99-201ENST00000408612 74 ntBASIC0□□□□□ -2.41
TNFP01375 RN7SKP200-201ENST00000410564 320 ntBASIC0□□□□□ -2.41
TNFP01375 RPL21P24-201ENST00000413752 448 ntBASIC0□□□□□ -2.41
TNFP01375 USP9YP14-201ENST00000430663 563 ntBASIC0□□□□□ -2.41
TNFP01375 AC073910.1-201ENST00000445047 438 ntBASIC0□□□□□ -2.41
TNFP01375 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0□□□□□ -2.41
TNFP01375 AL031313.1-201ENST00000448435 256 ntBASIC0□□□□□ -2.41
TNFP01375 MTND2P6-201ENST00000455337 1030 ntBASIC0□□□□□ -2.41
TNFP01375 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0□□□□□ -2.41
TNFP01375 LRRC34P2-201ENST00000514850 553 ntBASIC0□□□□□ -2.41
TNFP01375 AC091163.3-201ENST00000518269 1144 ntBASIC0□□□□□ -2.41
TNFP01375 SUMO2P16-201ENST00000519475 264 ntBASIC0□□□□□ -2.41
TNFP01375 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0□□□□□ -2.41
TNFP01375 AC023538.1-201ENST00000534576 736 ntBASIC0□□□□□ -2.41
TNFP01375 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0□□□□□ -2.41
TNFP01375 AC126365.2-201ENST00000580630 379 ntBASIC0□□□□□ -2.41
TNFP01375 MIR4742-201ENST00000581069 85 ntBASIC0□□□□□ -2.41
TNFP01375 MIR4305-201ENST00000583252 102 ntBASIC0□□□□□ -2.41
TNFP01375 AC068620.3-201ENST00000602749 560 ntBASIC0□□□□□ -2.41
TNFP01375 AL356157.2-201ENST00000605122 111 ntBASIC0□□□□□ -2.41
TNFP01375 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
TNFP01375 AC100812.1-201ENST00000607622 580 ntBASIC0□□□□□ -2.41
TNFP01375 AC007792.1-201ENST00000623023 402 ntBASIC0□□□□□ -2.41
TNFP01375 SNORD3E-202ENST00000627253 216 ntBASIC0□□□□□ -2.41
TNFP01375 PCMTD1P7-201ENST00000634506 357 ntBASIC0□□□□□ -2.41
TNFP01375 MTND4P21-201ENST00000453886 1357 ntBASIC-0.01□□□□□ -2.41
TNFP01375 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.01□□□□□ -2.41
TNFP01375 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.01□□□□□ -2.41
TNFP01375 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.01□□□□□ -2.41
TNFP01375 RPL23AP95-201ENST00000426806 265 ntBASIC-0.01□□□□□ -2.41
TNFP01375 LARP1BP3-201ENST00000437229 869 ntBASIC-0.01□□□□□ -2.41
TNFP01375 RNU7-34P-201ENST00000459394 64 ntBASIC-0.01□□□□□ -2.41
TNFP01375 HMGN1P10-201ENST00000474557 553 ntBASIC-0.01□□□□□ -2.41
TNFP01375 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.01□□□□□ -2.41
TNFP01375 AC093534.1-201ENST00000504977 132 ntBASIC-0.01□□□□□ -2.41
TNFP01375 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.01□□□□□ -2.41
TNFP01375 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.01□□□□□ -2.41
TNFP01375 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.01□□□□□ -2.41
TNFP01375 MIR5695-201ENST00000579717 85 ntBASIC-0.01□□□□□ -2.41
TNFP01375 AC010620.1-201ENST00000601088 1102 ntBASIC-0.01□□□□□ -2.41
TNFP01375 AL353778.1-201ENST00000603149 408 ntBASIC-0.01□□□□□ -2.41
TNFP01375 AL358072.1-201ENST00000604156 575 ntBASIC-0.01□□□□□ -2.41
TNFP01375 AC090517.2-201ENST00000614966 680 ntBASIC-0.01□□□□□ -2.41
TNFP01375 MIR1264-201ENST00000616374 69 ntBASIC-0.01□□□□□ -2.41
TNFP01375 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.01□□□□□ -2.41
TNFP01375 SNORD44.1-201ENST00000363202 61 ntBASIC-0.02□□□□□ -2.41
TNFP01375 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.02□□□□□ -2.41
TNFP01375 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC-0.02□□□□□ -2.41
TNFP01375 ARL5AP1-201ENST00000418991 388 ntBASIC-0.02□□□□□ -2.41
TNFP01375 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.02□□□□□ -2.41
TNFP01375 AC104982.1-201ENST00000478775 574 ntBASIC-0.02□□□□□ -2.41
TNFP01375 BLNK-209ENST00000495266 440 ntTSL 5 BASIC-0.02□□□□□ -2.41
TNFP01375 SNORA31.3-201ENST00000516029 96 ntBASIC-0.02□□□□□ -2.41
TNFP01375 AC011979.2-201ENST00000527568 352 ntBASIC-0.02□□□□□ -2.41
TNFP01375 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.02□□□□□ -2.41
TNFP01375 AL132657.2-201ENST00000564417 358 ntBASIC-0.02□□□□□ -2.41
TNFP01375 AC025678.1-201ENST00000567861 338 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms