Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC011890.2-201ENST00000613393 294 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 MTND4P23-201ENST00000447723 1363 ntBASIC2.3□□□□□ -2.04
CLDN1O95832 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CLDN1O95832 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CLDN1O95832 SNORD114-1-201ENST00000362705 72 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 RNU6-428P-201ENST00000362942 107 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 Y_RNA.356-201ENST00000365475 113 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLDN1O95832 RNU6-843P-201ENST00000384454 104 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLDN1O95832 RNU4-14P-201ENST00000410858 122 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.29□□□□□ -2.04
CLDN1O95832 MTND3P23-201ENST00000431980 347 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AC007969.2-201ENST00000441891 191 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AL031274.1-201ENST00000450334 232 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 Y_RNA.635-201ENST00000459041 101 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 RNU6-1037P-201ENST00000459571 107 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AC107626.1-201ENST00000471084 183 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AC103975.1-201ENST00000482506 483 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AP001025.1-201ENST00000486139 332 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AIG1P1-201ENST00000503376 148 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AC116337.1-201ENST00000509680 687 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 PTP4A1P4-201ENST00000512479 322 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 RNU6-377P-201ENST00000515965 102 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 RNA5SP282-201ENST00000516355 108 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 RNU6-1016P-201ENST00000516689 94 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 SNORA31.15-201ENST00000516771 132 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 SNORA31.23-201ENST00000517219 133 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AC093027.1-201ENST00000546698 429 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDN1O95832 AC103996.1-201ENST00000555468 102 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AL355375.2-201ENST00000574825 175 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDN1O95832 AL161423.1-201ENST00000613700 262 ntBASIC2.29□□□□□ -2.04
CLDN1O95832 RNU4-79P-201ENST00000362764 141 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 Y_RNA.338-201ENST00000365320 114 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 RNU6-622P-201ENST00000384272 103 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 Y_RNA.482-201ENST00000384377 111 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 MIR518C-201ENST00000384822 101 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 MIR627-201ENST00000384979 97 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 MIR767-201ENST00000390228 109 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 RNU6-293P-201ENST00000411259 106 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN1O95832 RPL37P10-201ENST00000412884 288 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 AC009414.1-201ENST00000427200 443 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 DAP3P1-201ENST00000441522 278 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 AC009296.1-201ENST00000443146 155 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.28□□□□□ -2.04
CLDN1O95832 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN1O95832 RPS27P27-201ENST00000498779 255 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.28□□□□□ -2.04
CLDN1O95832 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.28□□□□□ -2.04
CLDN1O95832 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN1O95832 RPL39P5-202ENST00000512505 151 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN1O95832 RN7SKP24-201ENST00000515888 284 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 CKS1BP7-201ENST00000522230 235 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.28□□□□□ -2.04
CLDN1O95832 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.28□□□□□ -2.04
CLDN1O95832 AC016727.1-205ENST00000605437 569 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 RNU6-91P-201ENST00000607774 107 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 U4.3-201ENST00000621047 82 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 AC244517.12-201ENST00000623581 663 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 MIR3529-201ENST00000637713 78 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.28□□□□□ -2.04
CLDN1O95832 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.28□□□□□ -2.05
CLDN1O95832 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.27□□□□□ -2.05
CLDN1O95832 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLDN1O95832 Y_RNA.226-201ENST00000364337 114 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 Y_RNA.387-201ENST00000383918 102 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 SNORD116-20-201ENST00000384529 92 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 RNA5SP354-201ENST00000391247 136 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 RNU6-325P-201ENST00000411132 105 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 AC007064.1-201ENST00000412238 351 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 AC074117.2-201ENST00000417130 397 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.27□□□□□ -2.05
CLDN1O95832 AL356320.1-201ENST00000429616 163 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 AL133396.1-201ENST00000432048 687 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN1O95832 HMGN2P23-201ENST00000456759 269 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.27□□□□□ -2.05
CLDN1O95832 SNORD5.1-201ENST00000458800 75 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 RPS29P27-201ENST00000463711 170 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.27□□□□□ -2.05
CLDN1O95832 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.27□□□□□ -2.05
CLDN1O95832 RN7SL636P-201ENST00000497504 294 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN1O95832 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.27□□□□□ -2.05
CLDN1O95832 RN7SKP40-201ENST00000517211 242 ntBASIC2.27□□□□□ -2.05
CLDN1O95832 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN1O95832 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.27□□□□□ -2.05
CLDN1O95832 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.27□□□□□ -2.05
CLDN1O95832 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CLDN1O95832 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CLDN1O95832 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CLDN1O95832 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CLDN1O95832 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms