Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CDKL5O76039 RNU6-874P-201ENST00000362390 105 ntBASIC3.33□□□□□ -1.88
CDKL5O76039 Y_RNA.222-201ENST00000364264 102 ntBASIC3.33□□□□□ -1.88
CDKL5O76039 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.33□□□□□ -1.88
CDKL5O76039 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.33□□□□□ -1.88
CDKL5O76039 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKL5O76039 AC104564.1-201ENST00000493028 407 ntBASIC3.33□□□□□ -1.88
CDKL5O76039 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.33□□□□□ -1.88
CDKL5O76039 SNORA70.24-201ENST00000517233 118 ntBASIC3.33□□□□□ -1.88
CDKL5O76039 AC109479.2-201ENST00000517842 174 ntBASIC3.33□□□□□ -1.88
CDKL5O76039 AC144568.1-201ENST00000520139 137 ntBASIC3.33□□□□□ -1.88
CDKL5O76039 MTND4LP5-201ENST00000605152 292 ntBASIC3.33□□□□□ -1.88
CDKL5O76039 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDKL5O76039 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKL5O76039 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.33□□□□□ -1.88
CDKL5O76039 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDKL5O76039 GABRG2-229ENST00000641017 3628 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDKL5O76039 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.32□□□□□ -1.88
CDKL5O76039 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDKL5O76039 Y_RNA.214-201ENST00000364201 112 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RNU6-336P-201ENST00000364891 107 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RNU6-806P-201ENST00000365147 105 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RNU5E-7P-201ENST00000365290 117 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RNU6-72P-201ENST00000384285 79 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 SNORA51.11-201ENST00000384442 131 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RNU6-140P-201ENST00000384566 108 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RNU6-713P-201ENST00000384761 107 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 MIR491-201ENST00000384877 84 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RNU6-700P-201ENST00000391043 107 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RPL21P75-201ENST00000396599 483 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RPL21P28-201ENST00000401418 483 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RNA5SP494-201ENST00000410653 129 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 AC007098.1-201ENST00000420122 367 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 ELOCP20-201ENST00000422460 345 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 AC092047.1-201ENST00000424997 240 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RPL21P39-201ENST00000463605 483 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 AC087190.1-201ENST00000484462 480 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 AC093591.1-201ENST00000491435 481 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 RPL21P16-201ENST00000495531 483 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKL5O76039 SCARNA13-201ENST00000516672 275 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKL5O76039 AC090517.1-201ENST00000569307 266 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 AC125232.2-201ENST00000592457 143 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 U6.99-201ENST00000637524 83 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 U4.7-201ENST00000638126 106 ntBASIC3.32□□□□□ -1.88
CDKL5O76039 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.32□□□□□ -1.88
CDKL5O76039 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CDKL5O76039 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDKL5O76039 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.32□□□□□ -1.88
CDKL5O76039 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL5O76039 AC233263.6-201ENST00000631132 1963 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 AL355596.1-201ENST00000565399 3996 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 FTLP6-201ENST00000355274 422 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 RNU6-78P-201ENST00000362897 107 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 Y_RNA.276-201ENST00000364732 109 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.31□□□□□ -1.88
CDKL5O76039 Z98749.2-208ENST00000381646 500 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 Y_RNA.461-201ENST00000384263 103 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 Y_RNA.551-201ENST00000384661 102 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 RNU6-1197P-201ENST00000391183 107 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 USP9YP16-201ENST00000430287 407 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 MTCO3P29-201ENST00000432119 779 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 NDUFB4P6-201ENST00000436819 366 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 RPL37P4-201ENST00000448908 268 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL5O76039 USP9YP23-201ENST00000455085 407 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.31□□□□□ -1.88
CDKL5O76039 SNORA25.11-201ENST00000515935 105 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 RNU6-377P-201ENST00000515965 102 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 RNU1-61P-201ENST00000516107 151 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 RNU6-397P-201ENST00000516226 104 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 RNU6-388P-201ENST00000517012 105 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 RNU6-389P-201ENST00000517048 105 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL5O76039 CYCSP39-201ENST00000565821 309 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 AMZ2P1-203ENST00000565833 850 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL5O76039 AL159153.1-201ENST00000619688 317 ntBASIC3.31□□□□□ -1.88
CDKL5O76039 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL5O76039 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CDKL5O76039 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL5O76039 SNORA9-201ENST00000384215 133 ntBASIC3.3□□□□□ -1.88
CDKL5O76039 RNU6-708P-201ENST00000384217 107 ntBASIC3.3□□□□□ -1.88
CDKL5O76039 MIR181A2-201ENST00000384863 110 ntBASIC3.3□□□□□ -1.88
CDKL5O76039 MT-TW-201ENST00000387382 68 ntBASIC3.3□□□□□ -1.88
CDKL5O76039 SNORA69.1-201ENST00000390904 137 ntBASIC3.3□□□□□ -1.88
CDKL5O76039 SNORA48.5-201ENST00000391143 135 ntBASIC3.3□□□□□ -1.88
CDKL5O76039 RPS29P13-201ENST00000402041 169 ntBASIC3.3□□□□□ -1.88
CDKL5O76039 Y_RNA.592-201ENST00000410274 109 ntBASIC3.3□□□□□ -1.88
CDKL5O76039 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL5O76039 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.3□□□□□ -1.88
CDKL5O76039 AL512844.2-201ENST00000433990 593 ntBASIC3.3□□□□□ -1.88
CDKL5O76039 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL5O76039 RPS29P6-201ENST00000438196 145 ntBASIC3.3□□□□□ -1.88
CDKL5O76039 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL5O76039 RPL30P10-201ENST00000488148 337 ntBASIC3.3□□□□□ -1.88
CDKL5O76039 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL5O76039 RNU6-408P-201ENST00000515910 100 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms