Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SNORA3C-201ENST00000408792 125 ntBASIC4.09□□□□□ -1.75
SOX1O00570 RNA5SP390-201ENST00000410191 113 ntBASIC4.09□□□□□ -1.75
SOX1O00570 RNU5E-9P-201ENST00000411164 104 ntBASIC4.09□□□□□ -1.75
SOX1O00570 FTH1P6-201ENST00000430768 320 ntBASIC4.09□□□□□ -1.75
SOX1O00570 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SOX1O00570 AC078918.1-201ENST00000498515 228 ntBASIC4.09□□□□□ -1.75
SOX1O00570 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.09□□□□□ -1.75
SOX1O00570 RNU6-237P-201ENST00000515985 71 ntBASIC4.09□□□□□ -1.75
SOX1O00570 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.09□□□□□ -1.75
SOX1O00570 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.75
SOX1O00570 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.09□□□□□ -1.75
SOX1O00570 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.09□□□□□ -1.75
SOX1O00570 AC005086.4-201ENST00000623065 213 ntBASIC4.09□□□□□ -1.75
SOX1O00570 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SOX1O00570 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
SOX1O00570 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SOX1O00570 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SOX1O00570 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX1O00570 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX1O00570 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX1O00570 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX1O00570 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX1O00570 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX1O00570 SNORD9-201ENST00000362566 104 ntBASIC4.08□□□□□ -1.76
SOX1O00570 RNU4-80P-201ENST00000363200 141 ntBASIC4.08□□□□□ -1.76
SOX1O00570 RNU6-312P-201ENST00000364629 107 ntBASIC4.08□□□□□ -1.76
SOX1O00570 SNORD116-18-201ENST00000383961 92 ntBASIC4.08□□□□□ -1.76
SOX1O00570 RNU6-22P-201ENST00000384355 107 ntBASIC4.08□□□□□ -1.76
SOX1O00570 Y_RNA.497-201ENST00000384447 98 ntBASIC4.08□□□□□ -1.76
SOX1O00570 RNU6-959P-201ENST00000384671 107 ntBASIC4.08□□□□□ -1.76
SOX1O00570 SNORA26.3-201ENST00000391119 136 ntBASIC4.08□□□□□ -1.76
SOX1O00570 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.08□□□□□ -1.76
SOX1O00570 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.08□□□□□ -1.76
SOX1O00570 VDAC1P3-201ENST00000434069 851 ntBASIC4.08□□□□□ -1.76
SOX1O00570 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.08□□□□□ -1.76
SOX1O00570 RPL39P29-201ENST00000447779 157 ntBASIC4.08□□□□□ -1.76
SOX1O00570 AC007215.1-201ENST00000464893 276 ntBASIC4.08□□□□□ -1.76
SOX1O00570 HMGB3P3-201ENST00000510526 400 ntBASIC4.08□□□□□ -1.76
SOX1O00570 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.08□□□□□ -1.76
SOX1O00570 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX1O00570 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX1O00570 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.08□□□□□ -1.76
SOX1O00570 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SOX1O00570 AL162274.2-201ENST00000614406 332 ntBASIC4.08□□□□□ -1.76
SOX1O00570 AC004467.1-201ENST00000615678 330 ntBASIC4.08□□□□□ -1.76
SOX1O00570 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.08□□□□□ -1.76
SOX1O00570 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.08□□□□□ -1.76
SOX1O00570 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SOX1O00570 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SOX1O00570 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SOX1O00570 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SOX1O00570 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX1O00570 Y_RNA.101-201ENST00000363154 102 ntBASIC4.07□□□□□ -1.76
SOX1O00570 RNU6-1285P-201ENST00000363480 105 ntBASIC4.07□□□□□ -1.76
SOX1O00570 SNORA5B-201ENST00000363786 132 ntBASIC4.07□□□□□ -1.76
SOX1O00570 RNU6-1130P-201ENST00000365434 107 ntBASIC4.07□□□□□ -1.76
SOX1O00570 RNU6-449P-201ENST00000383914 107 ntBASIC4.07□□□□□ -1.76
SOX1O00570 MIR607-201ENST00000385241 96 ntBASIC4.07□□□□□ -1.76
SOX1O00570 RBMY2UP-201ENST00000453474 324 ntBASIC4.07□□□□□ -1.76
SOX1O00570 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.07□□□□□ -1.76
SOX1O00570 RPS27AP10-201ENST00000496103 208 ntBASIC4.07□□□□□ -1.76
SOX1O00570 AC023141.12-201ENST00000512399 199 ntBASIC4.07□□□□□ -1.76
SOX1O00570 RNU6-479P-201ENST00000516348 105 ntBASIC4.07□□□□□ -1.76
SOX1O00570 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.07□□□□□ -1.76
SOX1O00570 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.07□□□□□ -1.76
SOX1O00570 MTND6P33-201ENST00000571794 183 ntBASIC4.07□□□□□ -1.76
SOX1O00570 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.07□□□□□ -1.76
SOX1O00570 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SOX1O00570 AC099654.7-201ENST00000635788 2127 ntBASIC4.07□□□□□ -1.76
SOX1O00570 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SOX1O00570 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX1O00570 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.06□□□□□ -1.76
SOX1O00570 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
SOX1O00570 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX1O00570 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SOX1O00570 AC010733.2-201ENST00000589496 5702 ntBASIC4.06□□□□□ -1.76
SOX1O00570 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX1O00570 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX1O00570 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.06□□□□□ -1.76
SOX1O00570 Y_RNA.7-201ENST00000362352 102 ntBASIC4.06□□□□□ -1.76
SOX1O00570 RNU6-50P-201ENST00000362356 103 ntBASIC4.06□□□□□ -1.76
SOX1O00570 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX1O00570 Y_RNA.400-201ENST00000383963 111 ntBASIC4.06□□□□□ -1.76
SOX1O00570 RNU6-245P-201ENST00000384020 107 ntBASIC4.06□□□□□ -1.76
SOX1O00570 RNU6-793P-201ENST00000384233 104 ntBASIC4.06□□□□□ -1.76
SOX1O00570 RNU1-44P-201ENST00000384453 163 ntBASIC4.06□□□□□ -1.76
SOX1O00570 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX1O00570 RAB28P5-201ENST00000427490 651 ntBASIC4.06□□□□□ -1.76
SOX1O00570 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.06□□□□□ -1.76
SOX1O00570 RPL26P9-201ENST00000457466 433 ntBASIC4.06□□□□□ -1.76
SOX1O00570 AC022795.1-201ENST00000473808 480 ntBASIC4.06□□□□□ -1.76
SOX1O00570 AL121594.1-201ENST00000475906 575 ntBASIC4.06□□□□□ -1.76
SOX1O00570 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.06□□□□□ -1.76
SOX1O00570 RNA5SP341-201ENST00000516261 117 ntBASIC4.06□□□□□ -1.76
SOX1O00570 RNU6-966P-201ENST00000516479 104 ntBASIC4.06□□□□□ -1.76
SOX1O00570 RNA5SP468-201ENST00000516782 93 ntBASIC4.06□□□□□ -1.76
SOX1O00570 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.06□□□□□ -1.76
SOX1O00570 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX1O00570 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SOX1O00570 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms