Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RPS27AP8-201ENST00000452665 445 ntBASIC2□□□□□ -2.09
DDX39AO00148 AC013470.1-201ENST00000453438 462 ntBASIC2□□□□□ -2.09
DDX39AO00148 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2□□□□□ -2.09
DDX39AO00148 SNRPFP3-201ENST00000457792 225 ntBASIC2□□□□□ -2.09
DDX39AO00148 RNA5SP57-201ENST00000459463 123 ntBASIC2□□□□□ -2.09
DDX39AO00148 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2□□□□□ -2.09
DDX39AO00148 AC145146.1-201ENST00000496370 254 ntBASIC2□□□□□ -2.09
DDX39AO00148 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2□□□□□ -2.09
DDX39AO00148 AC105417.1-201ENST00000514691 285 ntBASIC2□□□□□ -2.09
DDX39AO00148 SNORA25.15-201ENST00000516487 89 ntBASIC2□□□□□ -2.09
DDX39AO00148 SNORA25.17-201ENST00000517184 124 ntBASIC2□□□□□ -2.09
DDX39AO00148 AC069113.1-201ENST00000517763 267 ntBASIC2□□□□□ -2.09
DDX39AO00148 MTCO2P4-201ENST00000517968 247 ntBASIC2□□□□□ -2.09
DDX39AO00148 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2□□□□□ -2.09
DDX39AO00148 MIR4419B-201ENST00000577260 68 ntBASIC2□□□□□ -2.09
DDX39AO00148 MIR3941-201ENST00000582572 103 ntBASIC2□□□□□ -2.09
DDX39AO00148 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2□□□□□ -2.09
DDX39AO00148 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2□□□□□ -2.09
DDX39AO00148 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2□□□□□ -2.09
DDX39AO00148 GS1-279B7.1-204ENST00000641809 378 ntBASIC2□□□□□ -2.09
DDX39AO00148 ZNF680P1-201ENST00000436625 1469 ntBASIC2□□□□□ -2.09
DDX39AO00148 MTND4P14-201ENST00000435799 1354 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 RNU4-56P-201ENST00000364700 142 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
DDX39AO00148 RNU6-142P-201ENST00000384019 107 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 MTATP6P18-201ENST00000417994 673 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 AL117339.3-201ENST00000418733 162 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.99□□□□□ -2.09
DDX39AO00148 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.99□□□□□ -2.09
DDX39AO00148 AC010975.2-201ENST00000427781 588 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 MTND4P32-201ENST00000437189 1237 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.99□□□□□ -2.09
DDX39AO00148 AL356010.1-201ENST00000456364 102 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 AC132942.1-201ENST00000486753 483 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
DDX39AO00148 COPS8P3-201ENST00000526024 482 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.99□□□□□ -2.09
DDX39AO00148 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.99□□□□□ -2.09
DDX39AO00148 MTCO3P23-201ENST00000561363 289 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.99□□□□□ -2.09
DDX39AO00148 AC121247.2-201ENST00000604776 136 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 AP001596.2-201ENST00000608410 312 ntBASIC1.99□□□□□ -2.09
DDX39AO00148 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.99□□□□□ -2.09
DDX39AO00148 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
DDX39AO00148 RNU6-1120P-201ENST00000362988 108 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 SNORD32B-201ENST00000364460 84 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 SNORA51.11-201ENST00000384442 131 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 RNU6-160P-201ENST00000384591 107 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
DDX39AO00148 SNORA12-201ENST00000391162 147 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 RNA5SP501-201ENST00000410990 112 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 POLHP1-201ENST00000411806 470 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 AL590135.1-201ENST00000422215 156 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 AC019205.3-201ENST00000424573 156 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.98□□□□□ -2.09
DDX39AO00148 AL031667.1-201ENST00000440222 725 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 AC016700.2-201ENST00000446011 156 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 SNORD13-201ENST00000459299 104 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 BET1P1-201ENST00000482276 359 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 AC015911.1-201ENST00000495111 156 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 AK3P2-201ENST00000507976 429 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 AC107393.1-201ENST00000512403 346 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 Y_RNA.695-201ENST00000516715 107 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.98□□□□□ -2.09
DDX39AO00148 MIR4713-201ENST00000582691 75 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 APOOP1-201ENST00000604695 592 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 AC130454.1-201ENST00000622948 401 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
DDX39AO00148 AC233981.2-201ENST00000611524 1614 ntBASIC1.98□□□□□ -2.09
DDX39AO00148 RNU6-552P-201ENST00000362869 119 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 RNU6-23P-201ENST00000363283 107 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 Y_RNA.399-201ENST00000383955 105 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 RNU6-517P-201ENST00000384362 110 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 RPS29P13-201ENST00000402041 169 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 AL033519.2-201ENST00000403958 392 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.97□□□□□ -2.09
DDX39AO00148 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX39AO00148 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.97□□□□□ -2.09
DDX39AO00148 ARL2BPP4-201ENST00000506854 471 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX39AO00148 RNU6-237P-201ENST00000515985 71 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 RN7SKP219-201ENST00000516825 296 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 RNA5SP490-201ENST00000517141 136 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 AL137161.1-201ENST00000532231 390 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 AL356057.1-201ENST00000533798 831 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 HSPE1P4-201ENST00000550617 308 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 AGGF1P4-201ENST00000568249 801 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX39AO00148 AC110760.3-201ENST00000598794 467 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 AL356157.2-201ENST00000605122 111 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 U2.17-201ENST00000611454 95 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
DDX39AO00148 DUXAP9-208ENST00000622815 614 ntBASIC1.97□□□□□ -2.09
DDX39AO00148 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
DDX39AO00148 RNA5SP190-201ENST00000365222 118 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 RNU6-827P-201ENST00000365553 106 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 RN7SKP61-201ENST00000410642 295 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms