Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC002044.1-201ENST00000606707 158 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC024581.2-201ENST00000619986 252 ntBASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TMX2-CTNND1H3BSU7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR337-201ENST00000362281 93 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-451P-201ENST00000362921 107 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 Y_RNA.481-201ENST00000384373 102 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-434P-201ENST00000384376 107 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-1215P-201ENST00000384441 102 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-843P-201ENST00000384454 104 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 Y_RNA.505-201ENST00000384489 102 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-748P-201ENST00000384648 107 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR1294-201ENST00000408503 142 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR548F1-201ENST00000408667 84 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU2-20P-201ENST00000410425 191 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 Y_RNA.599-201ENST00000410489 109 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 MTND3P16-201ENST00000452205 344 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU7-167P-201ENST00000459160 62 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 MTCO3P38-201ENST00000468910 766 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-1038P-201ENST00000516516 104 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL157687.1-201ENST00000554853 619 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC005296.1-201ENST00000616145 209 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 uc_338.34-201ENST00000617467 174 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC098679.4-201ENST00000624241 654 ntBASIC1.74□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNY4P14-201ENST00000363656 96 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 Y_RNA.378-201ENST00000365652 113 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-622P-201ENST00000384272 103 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL627390.1-201ENST00000396055 340 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 FGF7P8-201ENST00000402994 292 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL133475.1-201ENST00000404414 305 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC013470.1-201ENST00000453438 462 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC117503.1-201ENST00000472241 394 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 HMGB1P30-201ENST00000492455 606 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC079598.5-201ENST00000547460 117 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC023043.2-201ENST00000589678 1026 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC146944.4-201ENST00000602697 718 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL670379.10-201ENST00000604330 253 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL670379.9-201ENST00000605428 253 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC104458.1-201ENST00000608243 463 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 uc_338.14-201ENST00000613162 166 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 FER-210ENST00000628534 558 ntTSL 5 BASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC068137.3-201ENST00000639191 341 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC010329.5-201ENST00000623497 2174 ntBASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-78P-201ENST00000362897 107 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNY3P3-201ENST00000363816 102 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-266P-201ENST00000364225 107 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-220P-201ENST00000390919 107 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL590002.1-201ENST00000406554 418 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNA5SP247-201ENST00000411181 105 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 SNORD56-201ENST00000413522 71 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC074117.2-201ENST00000417130 397 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AIMP1P2-201ENST00000425294 312 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 MTND1P4-201ENST00000435196 415 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC007969.2-201ENST00000441891 191 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 MED28P2-201ENST00000475771 317 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-1281P-201ENST00000516223 105 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-314P-201ENST00000516574 104 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 MTND4P7-201ENST00000523876 130 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AP004607.1-201ENST00000524456 203 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 CENPUP1-201ENST00000526649 1202 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC023050.3-201ENST00000541142 333 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC068790.6-201ENST00000602558 258 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC080078.2-201ENST00000603766 501 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 RNU6-89P-201ENST00000606519 100 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 RMST_3.1-201ENST00000611651 109 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 AC103705.1-201ENST00000619013 241 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 U4.7-201ENST00000638126 106 ntBASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.72□□□□□ -2.13
TMX2-CTNND1H3BSU7 RBBP8P1-201ENST00000449447 1844 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-37P-201ENST00000362692 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms