Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 RN7SKP61-201ENST00000410642 295 ntBASIC4.41□□□□□ -1.7
H3BM21 AC126124.2-201ENST00000413542 321 ntBASIC4.41□□□□□ -1.7
H3BM21 AL451050.1-201ENST00000450126 415 ntBASIC4.41□□□□□ -1.7
H3BM21 NDUFS5P3-201ENST00000450668 321 ntBASIC4.41□□□□□ -1.7
H3BM21 AC012671.1-201ENST00000451912 203 ntBASIC4.41□□□□□ -1.7
H3BM21 AC107297.1-201ENST00000459991 176 ntBASIC4.41□□□□□ -1.7
H3BM21 AC108022.1-201ENST00000493466 478 ntBASIC4.41□□□□□ -1.7
H3BM21 PARP4P3-201ENST00000510265 317 ntBASIC4.41□□□□□ -1.7
H3BM21 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.41□□□□□ -1.7
H3BM21 RNA5SP497-201ENST00000516081 97 ntBASIC4.41□□□□□ -1.7
H3BM21 SNORA31.9-201ENST00000516429 84 ntBASIC4.41□□□□□ -1.7
H3BM21 RN7SKP21-201ENST00000516503 220 ntBASIC4.41□□□□□ -1.7
H3BM21 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
H3BM21 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.41□□□□□ -1.7
H3BM21 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.41□□□□□ -1.7
H3BM21 AL359198.2-201ENST00000611836 194 ntBASIC4.41□□□□□ -1.7
H3BM21 U73479.1-201ENST00000618062 168 ntBASIC4.41□□□□□ -1.7
H3BM21 AC005086.4-201ENST00000623065 213 ntBASIC4.41□□□□□ -1.7
H3BM21 U6.99-201ENST00000637524 83 ntBASIC4.41□□□□□ -1.7
H3BM21 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H3BM21 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
H3BM21 AC092435.4-201ENST00000623012 4159 ntBASIC4.41□□□□□ -1.7
H3BM21 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
H3BM21 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
H3BM21 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.41□□□□□ -1.7
H3BM21 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H3BM21 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
H3BM21 AL139811.1-201ENST00000424779 2299 ntBASIC4.41□□□□□ -1.7
H3BM21 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
H3BM21 AL589743.1-201ENST00000551932 2712 ntBASIC4.4□□□□□ -1.7
H3BM21 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
H3BM21 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
H3BM21 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
H3BM21 Y_RNA.17-201ENST00000362433 111 ntBASIC4.4□□□□□ -1.71
H3BM21 SNORD56.1-201ENST00000362913 68 ntBASIC4.4□□□□□ -1.71
H3BM21 Y_RNA.243-201ENST00000364481 109 ntBASIC4.4□□□□□ -1.71
H3BM21 Y_RNA.342-201ENST00000365352 113 ntBASIC4.4□□□□□ -1.71
H3BM21 Y_RNA.432-201ENST00000384087 111 ntBASIC4.4□□□□□ -1.71
H3BM21 MIR23A-201ENST00000385245 73 ntBASIC4.4□□□□□ -1.71
H3BM21 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
H3BM21 Y_RNA.587-201ENST00000391210 103 ntBASIC4.4□□□□□ -1.71
H3BM21 RNU6-279P-201ENST00000391297 101 ntBASIC4.4□□□□□ -1.71
H3BM21 RPS26P8-201ENST00000393490 348 ntBASIC4.4□□□□□ -1.71
H3BM21 SNORA19.1-201ENST00000410656 129 ntBASIC4.4□□□□□ -1.71
H3BM21 AC012306.1-201ENST00000423267 114 ntBASIC4.4□□□□□ -1.71
H3BM21 HMGB1P37-201ENST00000439613 609 ntBASIC4.4□□□□□ -1.71
H3BM21 AL021397.1-201ENST00000451806 248 ntBASIC4.4□□□□□ -1.71
H3BM21 RPL31P41-201ENST00000477967 372 ntBASIC4.4□□□□□ -1.71
H3BM21 RN7SL817P-201ENST00000480777 288 ntBASIC4.4□□□□□ -1.71
H3BM21 VWA8P1-201ENST00000510889 176 ntBASIC4.4□□□□□ -1.71
H3BM21 RNA5SP446-201ENST00000515955 82 ntBASIC4.4□□□□□ -1.71
H3BM21 MRPL49P2-201ENST00000521066 465 ntBASIC4.4□□□□□ -1.71
H3BM21 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
H3BM21 RN7SL176P-201ENST00000580352 264 ntBASIC4.4□□□□□ -1.71
H3BM21 MIR3138-201ENST00000585238 82 ntBASIC4.4□□□□□ -1.71
H3BM21 AC025946.2-201ENST00000603398 234 ntBASIC4.4□□□□□ -1.71
H3BM21 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.4□□□□□ -1.71
H3BM21 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.4□□□□□ -1.71
H3BM21 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
H3BM21 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.4□□□□□ -1.71
H3BM21 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
H3BM21 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.4□□□□□ -1.71
H3BM21 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
H3BM21 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
H3BM21 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
H3BM21 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
H3BM21 RNU1-63P-201ENST00000383902 164 ntBASIC4.39□□□□□ -1.71
H3BM21 U1.1-201ENST00000384101 164 ntBASIC4.39□□□□□ -1.71
H3BM21 MIR544A-201ENST00000384855 91 ntBASIC4.39□□□□□ -1.71
H3BM21 MIR195-201ENST00000385194 87 ntBASIC4.39□□□□□ -1.71
H3BM21 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
H3BM21 MIR1193-201ENST00000408109 78 ntBASIC4.39□□□□□ -1.71
H3BM21 SNORA36B-201ENST00000410438 131 ntBASIC4.39□□□□□ -1.71
H3BM21 RNU2-68P-201ENST00000410878 191 ntBASIC4.39□□□□□ -1.71
H3BM21 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.39□□□□□ -1.71
H3BM21 AL691449.1-201ENST00000426570 421 ntBASIC4.39□□□□□ -1.71
H3BM21 CALM2P4-201ENST00000430810 426 ntBASIC4.39□□□□□ -1.71
H3BM21 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
H3BM21 AC007969.2-201ENST00000441891 191 ntBASIC4.39□□□□□ -1.71
H3BM21 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.39□□□□□ -1.71
H3BM21 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.39□□□□□ -1.71
H3BM21 snoU13.3-201ENST00000459441 104 ntBASIC4.39□□□□□ -1.71
H3BM21 AC006517.1-201ENST00000480485 328 ntBASIC4.39□□□□□ -1.71
H3BM21 RNU1-104P-201ENST00000517280 175 ntBASIC4.39□□□□□ -1.71
H3BM21 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
H3BM21 AC113403.1-201ENST00000604910 193 ntBASIC4.39□□□□□ -1.71
H3BM21 MIR548AY-201ENST00000617669 107 ntBASIC4.39□□□□□ -1.71
H3BM21 uc_338.13-201ENST00000618243 179 ntBASIC4.39□□□□□ -1.71
H3BM21 MIR6715B-201ENST00000637172 77 ntBASIC4.39□□□□□ -1.71
H3BM21 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.39□□□□□ -1.71
H3BM21 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.39□□□□□ -1.71
H3BM21 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
H3BM21 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
H3BM21 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.38□□□□□ -1.71
H3BM21 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
H3BM21 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.38□□□□□ -1.71
H3BM21 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.38□□□□□ -1.71
H3BM21 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.38□□□□□ -1.71
H3BM21 RNA5SP366-201ENST00000365454 123 ntBASIC4.38□□□□□ -1.71
H3BM21 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms