Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RN7SKP179-201ENST00000516126 217 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-678P-201ENST00000516832 109 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 MIR4529-201ENST00000578110 78 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AP000403.1-201ENST00000603349 851 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC093788.1-201ENST00000609356 927 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC023510.2-201ENST00000622162 746 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 AC019226.2-201ENST00000625973 424 ntBASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
COL6A6A6NMZ7 RNU6-512P-201ENST00000364438 103 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 SNORA16B-201ENST00000364674 135 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 RNU4-42P-201ENST00000364738 142 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 SNORA72.3-201ENST00000365074 132 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 RNU6-26P-201ENST00000383985 107 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 MIR150-201ENST00000385048 84 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 MIR29C-201ENST00000385231 88 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 SNORA40.19-201ENST00000390846 128 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 RNU6-903P-201ENST00000391270 109 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 RNU6-1025P-201ENST00000410629 104 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC007283.2-201ENST00000424739 197 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC092447.3-201ENST00000426027 686 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 RNU6-953P-201ENST00000459154 107 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC055731.1-201ENST00000474387 401 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 RNU2-44P-201ENST00000516795 194 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC026407.1-201ENST00000518369 204 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC103996.1-201ENST00000555468 102 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC002400.1-201ENST00000569310 726 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC090578.1-201ENST00000604955 591 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 U6.99-201ENST00000637524 83 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 MTND4P12-201ENST00000498999 1377 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 RNU5E-1-201ENST00000362477 120 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.60-201ENST00000362831 98 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 U3.4-201ENST00000363352 213 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 SNORD116-8-201ENST00000384365 95 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 MIR561-201ENST00000385216 97 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 MIR454-201ENST00000390180 115 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 RNU6-1106P-201ENST00000390845 107 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 RNU6-817P-201ENST00000391083 104 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 NDUFS5P1-201ENST00000405668 289 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 RPS15AP9-201ENST00000439856 381 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC079448.1-201ENST00000449377 373 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 MTCO3P7-201ENST00000510008 774 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 CYCSP23-201ENST00000519781 313 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AP001893.2-201ENST00000526949 202 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 OR5B19P-201ENST00000531766 928 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC079598.5-201ENST00000547460 117 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC021231.3-201ENST00000558497 370 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC073648.5-201ENST00000603502 305 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AC098614.4-201ENST00000607601 462 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 AP001506.1-201ENST00000615444 211 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 uc_338.15-201ENST00000615470 191 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 LINC02555-201ENST00000563933 1951 ntBASIC0.81□□□□□ -2.28
COL6A6A6NMZ7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 RNU4-56P-201ENST00000364700 142 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 U3.13-201ENST00000364804 214 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.480-201ENST00000384364 102 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 RNU11-3P-201ENST00000391111 133 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AL353621.1-201ENST00000418219 243 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AL160275.3-201ENST00000423876 471 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 SDAD1P3-201ENST00000427380 333 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC119618.1-201ENST00000434191 222 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 FABP5P14-201ENST00000437273 393 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 PRPS1P1-201ENST00000445305 876 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC107032.1-201ENST00000485945 480 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 RPL22P13-201ENST00000493291 347 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC009646.1-201ENST00000510455 318 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 Vault.3-201ENST00000516676 95 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 RNA5SP165-201ENST00000517142 115 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC107953.1-201ENST00000522216 297 ntBASIC0.8□□□□□ -2.28
COL6A6A6NMZ7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms