Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CGB1A6NKQ9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.89□□□□□ -1.95
CGB1A6NKQ9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CGB1A6NKQ9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CGB1A6NKQ9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CGB1A6NKQ9 AL353743.1-202ENST00000431724 1695 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CGB1A6NKQ9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CGB1A6NKQ9 MFSD8-236ENST00000641509 4050 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 MIR423-201ENST00000362201 94 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.88□□□□□ -1.95
CGB1A6NKQ9 RNU6-926P-201ENST00000384075 107 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 Y_RNA.506-201ENST00000384494 102 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 RNU6-125P-201ENST00000384505 107 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 U8.11-201ENST00000384699 133 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 U8.12-201ENST00000384701 133 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 MIR32-201ENST00000384965 70 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CGB1A6NKQ9 UBA52P6-201ENST00000399822 382 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 RNU5A-5P-201ENST00000411054 116 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 Y_RNA.626-201ENST00000411288 95 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 RHEBP3-201ENST00000411920 351 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.88□□□□□ -1.95
CGB1A6NKQ9 TRIAP1P1-201ENST00000427062 225 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 EIF1P2-201ENST00000428233 350 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.88□□□□□ -1.95
CGB1A6NKQ9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.88□□□□□ -1.95
CGB1A6NKQ9 AC005002.2-201ENST00000438228 269 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 RPS29P7-201ENST00000439662 171 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 U8.18-201ENST00000459285 133 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 RNU6-1114P-201ENST00000516022 107 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 Y_RNA.683-201ENST00000516508 93 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 SNORA43.2-201ENST00000516652 128 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 MIR2116-201ENST00000517221 80 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.88□□□□□ -1.95
CGB1A6NKQ9 PARP1P2-201ENST00000556806 195 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 H3F3AP1-201ENST00000559984 334 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 AC025281.1-201ENST00000567026 265 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CGB1A6NKQ9 MIR4286-201ENST00000580651 93 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 AL162424.1-201ENST00000602325 221 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 AC024153.1-201ENST00000603103 365 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CGB1A6NKQ9 SNORA50A-202ENST00000629536 136 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 AC110079.1-202ENST00000635213 138 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 CEP170P1-201ENST00000502249 4587 ntBASIC2.88□□□□□ -1.95
CGB1A6NKQ9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CGB1A6NKQ9 RNU6-682P-201ENST00000363843 106 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 RN7SKP280-201ENST00000364196 304 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 RNY4P28-201ENST00000365281 93 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 RNU6-318P-201ENST00000384283 103 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 RN7SKP156-201ENST00000410308 342 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 SNORD12B-201ENST00000410433 91 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 RNA5SP44-201ENST00000410446 133 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 RNU6-628P-201ENST00000410675 107 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 RNU6-1245P-201ENST00000411130 106 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 COX6CP10-201ENST00000416832 224 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 AC006989.1-201ENST00000427212 131 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.87□□□□□ -1.95
CGB1A6NKQ9 TMSB4XP3-201ENST00000445144 114 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.87□□□□□ -1.95
CGB1A6NKQ9 RN7SL385P-201ENST00000468873 276 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 AP000870.1-201ENST00000472927 406 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 AC093663.1-201ENST00000497190 394 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 AC026402.1-201ENST00000513642 170 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 LINC00933-203ENST00000559812 219 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 CYCSP39-201ENST00000565821 309 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.87□□□□□ -1.95
CGB1A6NKQ9 AC072026.1-201ENST00000605023 201 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.87□□□□□ -1.95
CGB1A6NKQ9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.87□□□□□ -1.95
CGB1A6NKQ9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CGB1A6NKQ9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CGB1A6NKQ9 AC058791.1-201ENST00000608412 3198 ntBASIC2.87□□□□□ -1.95
CGB1A6NKQ9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.87□□□□□ -1.95
CGB1A6NKQ9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CGB1A6NKQ9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.87□□□□□ -1.95
CGB1A6NKQ9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.86□□□□□ -1.95
CGB1A6NKQ9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.86□□□□□ -1.95
CGB1A6NKQ9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CGB1A6NKQ9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.86□□□□□ -1.95
CGB1A6NKQ9 SNORA25.1-201ENST00000362326 128 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 RNU6-1020P-201ENST00000363684 107 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 Y_RNA.292-201ENST00000364904 97 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 RNU6-21P-201ENST00000384710 107 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 Y_RNA.569-201ENST00000384749 103 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 MIR767-201ENST00000390228 109 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CGB1A6NKQ9 Z98941.1-201ENST00000407764 100 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 RNU6-1140P-201ENST00000410517 106 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 AL390729.2-201ENST00000416137 156 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 AC096649.2-201ENST00000416186 393 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 MTCO1P5-201ENST00000433573 344 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 RPS15AP5-201ENST00000436276 388 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CGB1A6NKQ9 RPS29P12-201ENST00000460178 152 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 AC087477.1-201ENST00000465747 340 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 MRPL42P6-201ENST00000486397 371 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 RPL30P1-201ENST00000488676 339 ntBASIC2.86□□□□□ -1.95
CGB1A6NKQ9 RPS27P26-201ENST00000494583 239 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms