Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 RNU6-238P-201ENST00000363313 106 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 Y_RNA.210-201ENST00000364161 110 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 RNA5SP139-201ENST00000364340 117 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC78A2IDD5 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 RNA5SP494-201ENST00000410653 129 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 PCNPP5-201ENST00000452246 481 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC78A2IDD5 RAC1P5-201ENST00000512182 576 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 SCARNA13-201ENST00000516672 275 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 AC034114.1-201ENST00000520293 285 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 AC060766.3-201ENST00000591442 263 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 RPL23AP78-201ENST00000599928 470 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC78A2IDD5 MIR1244-1-201ENST00000612829 85 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 AL159153.1-201ENST00000619688 317 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC78A2IDD5 AC090617.7-201ENST00000623952 126 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 MIR1244-3-201ENST00000635744 85 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 MIR1244-2-201ENST00000636449 85 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 MIR1244-4-202ENST00000636813 85 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC78A2IDD5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC78A2IDD5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC78A2IDD5 AC091564.4-201ENST00000533934 2194 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC78A2IDD5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC78A2IDD5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC78A2IDD5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC78A2IDD5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC78A2IDD5 RNU1-76P-201ENST00000362903 159 ntBASIC3.23□□□□□ -1.89
CCDC78A2IDD5 Y_RNA.123-201ENST00000363338 102 ntBASIC3.23□□□□□ -1.89
CCDC78A2IDD5 RNU6-898P-201ENST00000365627 104 ntBASIC3.23□□□□□ -1.89
CCDC78A2IDD5 RNU6-611P-201ENST00000384276 104 ntBASIC3.23□□□□□ -1.89
CCDC78A2IDD5 AL357075.1-201ENST00000404107 726 ntBASIC3.23□□□□□ -1.89
CCDC78A2IDD5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC78A2IDD5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC78A2IDD5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC78A2IDD5 AC097462.2-201ENST00000504623 481 ntBASIC3.23□□□□□ -1.89
CCDC78A2IDD5 SNORA25.11-201ENST00000515935 105 ntBASIC3.23□□□□□ -1.89
CCDC78A2IDD5 Y_RNA.706-201ENST00000516933 99 ntBASIC3.23□□□□□ -1.89
CCDC78A2IDD5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.23□□□□□ -1.89
CCDC78A2IDD5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC78A2IDD5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC78A2IDD5 AC062037.2-201ENST00000610137 73 ntBASIC3.23□□□□□ -1.89
CCDC78A2IDD5 SCARNA4-201ENST00000629045 128 ntBASIC3.23□□□□□ -1.89
CCDC78A2IDD5 AC110079.1-202ENST00000635213 138 ntBASIC3.23□□□□□ -1.89
CCDC78A2IDD5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC78A2IDD5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC78A2IDD5 OR56A5-201ENST00000340110 738 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 RNU1-105P-201ENST00000363470 161 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 SNORD115-32-201ENST00000364079 82 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 RNU1-100P-201ENST00000365255 165 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 RNU6-142P-201ENST00000384019 107 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 Y_RNA.471-201ENST00000384312 102 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 RNU6-505P-201ENST00000384427 107 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 SNORA51.11-201ENST00000384442 131 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 MIR767-201ENST00000390228 109 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC78A2IDD5 RPS29P12-201ENST00000460178 152 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 RPS26P21-201ENST00000475397 348 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 RPS27AP10-201ENST00000496103 208 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 RNU6-408P-201ENST00000515910 100 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 RNU6-1271P-201ENST00000517049 105 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC78A2IDD5 AC073657.2-201ENST00000605661 303 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 RMST_6.1-201ENST00000611980 203 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 uc_338.25-201ENST00000613756 156 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 AC137590.2-201ENST00000619709 240 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 AC009541.1-201ENST00000438279 2662 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 AC233981.2-201ENST00000611524 1614 ntBASIC3.22□□□□□ -1.89
CCDC78A2IDD5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC78A2IDD5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.89
CCDC78A2IDD5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC78A2IDD5 AC110491.1-201ENST00000562191 2010 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC78A2IDD5 Y_RNA.288-201ENST00000364854 92 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 RNU6-487P-201ENST00000365430 104 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 RNU6-1286P-201ENST00000383871 107 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 MIR128-1-201ENST00000384921 82 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 U3.19-201ENST00000390893 196 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 RNA5SP354-201ENST00000391247 136 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 NDUFB4P4-201ENST00000404822 243 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 RPL23AP95-201ENST00000426806 265 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 AL365496.1-201ENST00000426885 215 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC78A2IDD5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC78A2IDD5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.21□□□□□ -1.9
CCDC78A2IDD5 HMGN2P10-201ENST00000448085 265 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 snoU13.30-201ENST00000458951 104 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 RNU7-169P-201ENST00000459456 61 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 RPS27P26-201ENST00000494583 239 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 RNU2-53P-201ENST00000516257 147 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 RN7SKP282-201ENST00000516824 299 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 SNORA40.15-201ENST00000516884 107 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC78A2IDD5 AL442163.3-201ENST00000554110 156 ntBASIC3.21□□□□□ -1.9
CCDC78A2IDD5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms