Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.71□□□□□ -2.14
CLRN2A0PK11 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.71□□□□□ -2.14
CLRN2A0PK11 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.71□□□□□ -2.14
CLRN2A0PK11 BZW1P2-201ENST00000473537 826 ntBASIC1.71□□□□□ -2.14
CLRN2A0PK11 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.71□□□□□ -2.14
CLRN2A0PK11 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.71□□□□□ -2.14
CLRN2A0PK11 ATP5EP1-201ENST00000510257 156 ntBASIC1.71□□□□□ -2.14
CLRN2A0PK11 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.71□□□□□ -2.14
CLRN2A0PK11 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.71□□□□□ -2.14
CLRN2A0PK11 RNVU1-2-201ENST00000516326 135 ntBASIC1.71□□□□□ -2.14
CLRN2A0PK11 RNU6-1178P-201ENST00000516674 107 ntBASIC1.71□□□□□ -2.14
CLRN2A0PK11 RNU6-685P-201ENST00000517088 95 ntBASIC1.71□□□□□ -2.14
CLRN2A0PK11 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.71□□□□□ -2.14
CLRN2A0PK11 AL356057.1-201ENST00000533798 831 ntBASIC1.71□□□□□ -2.14
CLRN2A0PK11 AC090578.1-201ENST00000604955 591 ntBASIC1.71□□□□□ -2.14
CLRN2A0PK11 AC092354.1-201ENST00000606057 376 ntBASIC1.71□□□□□ -2.14
CLRN2A0PK11 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.71□□□□□ -2.14
CLRN2A0PK11 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.71□□□□□ -2.14
CLRN2A0PK11 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
CLRN2A0PK11 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CLRN2A0PK11 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CLRN2A0PK11 RNA5SP493-201ENST00000364115 91 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 RNU6-45P-201ENST00000384471 107 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 RNA5SP100-201ENST00000410903 110 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 RNA5SP59-201ENST00000410922 110 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 RPS3AP3-201ENST00000411933 242 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 Z99497.1-201ENST00000421282 135 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 MTND2P4-201ENST00000445034 1004 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 RNU6-333P-201ENST00000459117 107 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.7□□□□□ -2.14
CLRN2A0PK11 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.7□□□□□ -2.14
CLRN2A0PK11 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.7□□□□□ -2.14
CLRN2A0PK11 RNU6-1129P-201ENST00000515964 104 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 RNU5F-2P-201ENST00000516066 82 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 RNU6-759P-201ENST00000516740 103 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 RNU6-232P-201ENST00000517144 64 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.7□□□□□ -2.14
CLRN2A0PK11 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.7□□□□□ -2.14
CLRN2A0PK11 AC008015.1-201ENST00000555505 465 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.7□□□□□ -2.14
CLRN2A0PK11 AC009094.1-201ENST00000564443 426 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.7□□□□□ -2.14
CLRN2A0PK11 MIR3682-201ENST00000581338 84 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.7□□□□□ -2.14
CLRN2A0PK11 RNU6-37P-201ENST00000362692 107 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 RNU6-11P-201ENST00000364234 107 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 RNU6-25P-201ENST00000383873 107 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 RNU6-48P-201ENST00000384161 107 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 RNU6-16P-201ENST00000384385 107 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 RNU6-15P-201ENST00000384534 107 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 RNU6-29P-201ENST00000384637 107 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.69□□□□□ -2.14
CLRN2A0PK11 KATNBL1P3-201ENST00000443475 909 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 RNA5SP220-201ENST00000516298 104 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 RNU6-410P-201ENST00000517006 107 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 AC106038.2-201ENST00000520706 568 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 TRAV32-201ENST00000553993 340 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 AC010928.2-201ENST00000588017 287 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 AL078603.1-201ENST00000603824 313 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 Z84480.1-201ENST00000605131 311 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 AC123912.5-201ENST00000605470 343 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 MIR98-201ENST00000606724 119 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 AC122133.1-201ENST00000613964 233 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 AC138649.3-201ENST00000622154 254 ntBASIC1.69□□□□□ -2.14
CLRN2A0PK11 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.69□□□□□ -2.14
CLRN2A0PK11 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CLRN2A0PK11 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.69□□□□□ -2.14
CLRN2A0PK11 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.69□□□□□ -2.14
CLRN2A0PK11 RNA5SP363-201ENST00000365072 115 ntBASIC1.68□□□□□ -2.14
CLRN2A0PK11 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.68□□□□□ -2.14
CLRN2A0PK11 RNU6-338P-201ENST00000383888 105 ntBASIC1.68□□□□□ -2.14
CLRN2A0PK11 AL031577.2-201ENST00000404133 280 ntBASIC1.68□□□□□ -2.14
CLRN2A0PK11 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.68□□□□□ -2.14
CLRN2A0PK11 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.68□□□□□ -2.14
CLRN2A0PK11 SNRPGP13-201ENST00000442212 177 ntBASIC1.68□□□□□ -2.14
CLRN2A0PK11 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.68□□□□□ -2.14
CLRN2A0PK11 GAPDHP17-201ENST00000449858 1001 ntBASIC1.68□□□□□ -2.14
CLRN2A0PK11 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CLRN2A0PK11 RNU6-377P-201ENST00000515965 102 ntBASIC1.68□□□□□ -2.14
CLRN2A0PK11 MIR449C-201ENST00000516047 92 ntBASIC1.68□□□□□ -2.14
CLRN2A0PK11 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.68□□□□□ -2.14
CLRN2A0PK11 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.68□□□□□ -2.14
CLRN2A0PK11 AC090572.1-201ENST00000519251 160 ntBASIC1.68□□□□□ -2.14
CLRN2A0PK11 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.68□□□□□ -2.14
CLRN2A0PK11 MIR3169-201ENST00000578032 83 ntBASIC1.68□□□□□ -2.14
CLRN2A0PK11 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.68□□□□□ -2.14
CLRN2A0PK11 AL590240.4-201ENST00000616908 390 ntBASIC1.68□□□□□ -2.14
CLRN2A0PK11 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLRN2A0PK11 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CLRN2A0PK11 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLRN2A0PK11 Y_RNA.324-201ENST00000365165 102 ntBASIC1.67□□□□□ -2.14
CLRN2A0PK11 Y_RNA.367-201ENST00000365544 101 ntBASIC1.67□□□□□ -2.14
CLRN2A0PK11 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CLRN2A0PK11 SNORA40.3-201ENST00000390964 122 ntBASIC1.67□□□□□ -2.14
CLRN2A0PK11 RNU6-550P-201ENST00000391057 101 ntBASIC1.67□□□□□ -2.14
CLRN2A0PK11 RNU2-3P-201ENST00000410144 191 ntBASIC1.67□□□□□ -2.14
CLRN2A0PK11 RNU6-607P-201ENST00000411283 108 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms