Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHISA3A0PJX4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.51□□□□□ -1.85
SHISA3A0PJX4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHISA3A0PJX4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.51□□□□□ -1.85
SHISA3A0PJX4 Y_RNA.23-201ENST00000362496 106 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 RNU1-32P-201ENST00000363937 159 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 Y_RNA.238-201ENST00000364441 102 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 Y_RNA.329-201ENST00000365209 107 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 Y_RNA.415-201ENST00000384012 112 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 MIR147B-201ENST00000390185 80 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 AIMP1P2-201ENST00000425294 312 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 snoU13.1-201ENST00000459157 104 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 RN7SL459P-201ENST00000481078 302 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.51□□□□□ -1.85
SHISA3A0PJX4 IGLVIV-65-201ENST00000517313 360 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.51□□□□□ -1.85
SHISA3A0PJX4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.51□□□□□ -1.85
SHISA3A0PJX4 TCL6_2.1-201ENST00000615162 119 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 AC244205.2-202ENST00000635781 342 ntBASIC3.51□□□□□ -1.85
SHISA3A0PJX4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
SHISA3A0PJX4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHISA3A0PJX4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHISA3A0PJX4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 AC010889.1-201ENST00000566193 2666 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 Y_RNA.75-201ENST00000362927 97 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 RNU6-529P-201ENST00000363383 104 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 SNORD35B-201ENST00000363660 87 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 U3.9-201ENST00000363823 204 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 RNU6-198P-201ENST00000384258 104 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 U3.40-201ENST00000408706 208 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 RHEBP3-201ENST00000411920 351 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 AL356387.2-201ENST00000422272 243 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 PHBP16-201ENST00000446318 950 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 AC010099.1-201ENST00000455434 375 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 RN7SL98P-201ENST00000462271 300 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 RN7SL132P-201ENST00000478131 296 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 RNU6-436P-201ENST00000516171 114 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 MIR5096-201ENST00000583713 70 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 AC069200.1-201ENST00000609511 323 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 MIR7151-201ENST00000617477 60 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 AC068205.3-201ENST00000636385 468 ntBASIC3.5□□□□□ -1.85
SHISA3A0PJX4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHISA3A0PJX4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 RNU6-324P-201ENST00000363957 106 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 SNORD116-18-201ENST00000383961 92 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 AL138878.1-201ENST00000405131 347 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 RPS3P1-201ENST00000456781 192 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 Y_RNA.637-201ENST00000459424 114 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 AC091179.1-201ENST00000461606 579 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 RN7SL860P-201ENST00000473738 223 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 RPS27AP9-201ENST00000477681 438 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 AP000867.2-201ENST00000532468 320 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 MIR5684-201ENST00000585074 65 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 MFSD8-216ENST00000641147 4009 ntBASIC3.49□□□□□ -1.85
SHISA3A0PJX4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SHISA3A0PJX4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHISA3A0PJX4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.48□□□□□ -1.85
SHISA3A0PJX4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.48□□□□□ -1.85
SHISA3A0PJX4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SHISA3A0PJX4 RNU4-15P-201ENST00000362613 141 ntBASIC3.48□□□□□ -1.85
SHISA3A0PJX4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.48□□□□□ -1.85
SHISA3A0PJX4 RNU6-454P-201ENST00000364292 107 ntBASIC3.48□□□□□ -1.85
SHISA3A0PJX4 Y_RNA.343-201ENST00000365354 112 ntBASIC3.48□□□□□ -1.85
SHISA3A0PJX4 RNU6-449P-201ENST00000383914 107 ntBASIC3.48□□□□□ -1.85
SHISA3A0PJX4 RNU6-750P-201ENST00000390946 107 ntBASIC3.48□□□□□ -1.85
SHISA3A0PJX4 AL133475.1-201ENST00000404414 305 ntBASIC3.48□□□□□ -1.85
SHISA3A0PJX4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHISA3A0PJX4 RNU2-49P-201ENST00000410666 184 ntBASIC3.48□□□□□ -1.85
SHISA3A0PJX4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.48□□□□□ -1.85
SHISA3A0PJX4 TOMM22P2-201ENST00000430735 237 ntBASIC3.48□□□□□ -1.85
SHISA3A0PJX4 TPT1P12-201ENST00000448968 492 ntBASIC3.48□□□□□ -1.85
SHISA3A0PJX4 RNA5SP246-201ENST00000458909 119 ntBASIC3.48□□□□□ -1.85
SHISA3A0PJX4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms