Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 DEFB108E-201ENST00000524692 240 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 LRRC6P1-201ENST00000532188 885 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC009712.1-201ENST00000564938 316 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MIR4714-201ENST00000580728 77 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC008088.1-201ENST00000580993 280 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC008945.2-201ENST00000606056 604 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 7SK.8-201ENST00000612110 250 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 7SK.11-201ENST00000615477 250 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 7SK.13-201ENST00000622040 250 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 OR4G3P-201ENST00000633500 913 ntBASIC0.57□□□□□ -2.32
TCRBV4S1A1TA0A5B7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 SNORA63.3-201ENST00000362682 132 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU1-133P-201ENST00000364867 167 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 Y_RNA.466-201ENST00000384294 113 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MIR100-201ENST00000385259 80 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC013410.2-201ENST00000422627 201 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL606490.4-201ENST00000423117 127 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MTND4LP16-201ENST00000440828 295 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 SNRPEP8-201ENST00000442866 260 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RPL31P3-201ENST00000458430 332 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL163195.1-201ENST00000496941 348 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MTCO3P28-201ENST00000513351 515 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNA5SP436-201ENST00000516020 115 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 ACA64.5-201ENST00000516207 127 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNA5SP481-201ENST00000516814 122 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 SNORD60.2-201ENST00000516883 86 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 CYP4A27P-201ENST00000567218 190 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MIR3664-201ENST00000579074 99 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 DEFB131E-202ENST00000602581 683 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL353778.1-201ENST00000603149 408 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC018889.1-201ENST00000605372 397 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MIR3976-201ENST00000606807 139 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC091965.4-201ENST00000607691 587 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL451064.1-201ENST00000607718 471 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC104073.3-201ENST00000610942 955 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL121895.2-201ENST00000619558 447 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC131159.1-201ENST00000621854 213 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 FRG1KP-201ENST00000623592 341 ntBASIC0.56□□□□□ -2.32
TCRBV4S1A1TA0A5B7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC008163.1-202ENST00000636004 2889 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-37P-201ENST00000362692 107 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-960P-201ENST00000364056 120 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-11P-201ENST00000364234 107 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-1105P-201ENST00000384774 107 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MIR578-201ENST00000384828 96 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-298P-201ENST00000390888 96 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 SNORA12.2-201ENST00000391040 156 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC006461.1-201ENST00000412637 326 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL031779.1-201ENST00000415663 330 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 POLR2J4-204ENST00000418424 324 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MTND4P20-201ENST00000424125 869 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RPL23AP30-201ENST00000432419 501 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC006026.2-201ENST00000457376 180 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC117454.1-201ENST00000491120 168 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC145146.1-201ENST00000496370 254 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNA5SP503-201ENST00000517047 117 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 CYCSP23-201ENST00000519781 313 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC006386.1-201ENST00000619436 415 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RMST_7.1-201ENST00000621935 268 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC126544.2-201ENST00000625174 749 ntBASIC0.55□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC009541.1-201ENST00000438279 2662 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 HSBP1P2-201ENST00000299671 229 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-862P-201ENST00000362804 105 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-78P-201ENST00000362897 107 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 SNORA4.1-201ENST00000364263 144 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU1-36P-201ENST00000365130 165 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-413P-201ENST00000384115 107 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-342P-201ENST00000384521 104 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU6-1176P-201ENST00000390955 107 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 RNU1-139P-201ENST00000391307 165 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MTCO3P41-201ENST00000414801 328 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 PIGFP2-201ENST00000421400 651 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC079140.3-201ENST00000511111 550 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 SCARNA16.2-201ENST00000516520 172 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC013828.2-201ENST00000532487 235 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MIR548AC-201ENST00000585049 88 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 MIR4653-201ENST00000585107 83 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AL034555.1-201ENST00000604816 211 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 AC072039.2-201ENST00000608883 439 ntBASIC0.54□□□□□ -2.32
TCRBV4S1A1TA0A5B7 PVT1_3.1-201ENST00000620853 95 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms