Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
U3KQE9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.47□□□□□ -1.85
U3KQE9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.47□□□□□ -1.85
U3KQE9 AC092435.4-201ENST00000623012 4159 ntBASIC3.47□□□□□ -1.85
U3KQE9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
U3KQE9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
U3KQE9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
U3KQE9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
U3KQE9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
U3KQE9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.46□□□□□ -1.86
U3KQE9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
U3KQE9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
U3KQE9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
U3KQE9 RNU6-1298P-201ENST00000362456 101 ntBASIC3.46□□□□□ -1.86
U3KQE9 RNU6-915P-201ENST00000364943 103 ntBASIC3.46□□□□□ -1.86
U3KQE9 SNORA18.2-201ENST00000383865 132 ntBASIC3.46□□□□□ -1.86
U3KQE9 MIR586-201ENST00000385035 97 ntBASIC3.46□□□□□ -1.86
U3KQE9 MIR708-201ENST00000390708 88 ntBASIC3.46□□□□□ -1.86
U3KQE9 RNA5SP397-201ENST00000391323 118 ntBASIC3.46□□□□□ -1.86
U3KQE9 AC245047.4-201ENST00000433189 144 ntBASIC3.46□□□□□ -1.86
U3KQE9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.46□□□□□ -1.86
U3KQE9 RPL36AP21-201ENST00000490372 323 ntBASIC3.46□□□□□ -1.86
U3KQE9 RNU2-44P-201ENST00000516795 194 ntBASIC3.46□□□□□ -1.86
U3KQE9 AC090142.3-201ENST00000519012 385 ntBASIC3.46□□□□□ -1.86
U3KQE9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.46□□□□□ -1.86
U3KQE9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.46□□□□□ -1.86
U3KQE9 RN7SL690P-201ENST00000582087 240 ntBASIC3.46□□□□□ -1.86
U3KQE9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.46□□□□□ -1.86
U3KQE9 AC211433.2-201ENST00000608433 387 ntBASIC3.46□□□□□ -1.86
U3KQE9 AC099778.2-201ENST00000610904 211 ntBASIC3.46□□□□□ -1.86
U3KQE9 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.46□□□□□ -1.86
U3KQE9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.46□□□□□ -1.86
U3KQE9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.46□□□□□ -1.86
U3KQE9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.46□□□□□ -1.86
U3KQE9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
U3KQE9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
U3KQE9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
U3KQE9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.46□□□□□ -1.86
U3KQE9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
U3KQE9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.45□□□□□ -1.86
U3KQE9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
U3KQE9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
U3KQE9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.45□□□□□ -1.86
U3KQE9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
U3KQE9 SNORA71.2-201ENST00000364941 134 ntBASIC3.45□□□□□ -1.86
U3KQE9 Y_RNA.309-201ENST00000365046 111 ntBASIC3.45□□□□□ -1.86
U3KQE9 RNA5SP22-201ENST00000365393 109 ntBASIC3.45□□□□□ -1.86
U3KQE9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
U3KQE9 RNU1-63P-201ENST00000383902 164 ntBASIC3.45□□□□□ -1.86
U3KQE9 RNU6-429P-201ENST00000384582 108 ntBASIC3.45□□□□□ -1.86
U3KQE9 MT-TT-201ENST00000387460 66 ntBASIC3.45□□□□□ -1.86
U3KQE9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.45□□□□□ -1.86
U3KQE9 MIR3065-201ENST00000390137 79 ntBASIC3.45□□□□□ -1.86
U3KQE9 MIR298-201ENST00000401212 88 ntBASIC3.45□□□□□ -1.86
U3KQE9 RN7SKP167-201ENST00000411047 285 ntBASIC3.45□□□□□ -1.86
U3KQE9 CRYBB2P1-203ENST00000415709 538 ntBASIC3.45□□□□□ -1.86
U3KQE9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.45□□□□□ -1.86
U3KQE9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.45□□□□□ -1.86
U3KQE9 RPS4XP2-201ENST00000458402 793 ntBASIC3.45□□□□□ -1.86
U3KQE9 AP002884.2-201ENST00000471647 395 ntBASIC3.45□□□□□ -1.86
U3KQE9 IGLV2-34-201ENST00000490007 283 ntBASIC3.45□□□□□ -1.86
U3KQE9 AC145146.1-201ENST00000496370 254 ntBASIC3.45□□□□□ -1.86
U3KQE9 RNU1-61P-201ENST00000516107 151 ntBASIC3.45□□□□□ -1.86
U3KQE9 SNORA72.7-201ENST00000516349 94 ntBASIC3.45□□□□□ -1.86
U3KQE9 RNU7-115P-201ENST00000516433 55 ntBASIC3.45□□□□□ -1.86
U3KQE9 RNU6-589P-201ENST00000516485 107 ntBASIC3.45□□□□□ -1.86
U3KQE9 AL160236.1-201ENST00000556317 195 ntBASIC3.45□□□□□ -1.86
U3KQE9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.45□□□□□ -1.86
U3KQE9 HMGN2P15-201ENST00000585707 270 ntBASIC3.45□□□□□ -1.86
U3KQE9 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.45□□□□□ -1.86
U3KQE9 AC069200.1-201ENST00000609511 323 ntBASIC3.45□□□□□ -1.86
U3KQE9 MIR3914-2-201ENST00000637339 95 ntBASIC3.45□□□□□ -1.86
U3KQE9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
U3KQE9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.45□□□□□ -1.86
U3KQE9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
U3KQE9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
U3KQE9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
U3KQE9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
U3KQE9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
U3KQE9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.44□□□□□ -1.86
U3KQE9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.44□□□□□ -1.86
U3KQE9 ZNF702P-202ENST00000434269 1966 ntBASIC3.44□□□□□ -1.86
U3KQE9 AC069528.2-201ENST00000624849 1991 ntBASIC3.44□□□□□ -1.86
U3KQE9 Y_RNA.40-201ENST00000362645 93 ntBASIC3.44□□□□□ -1.86
U3KQE9 RNU6-655P-201ENST00000362858 107 ntBASIC3.44□□□□□ -1.86
U3KQE9 RNA5SP307-201ENST00000362863 116 ntBASIC3.44□□□□□ -1.86
U3KQE9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
U3KQE9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
U3KQE9 U1.1-201ENST00000384101 164 ntBASIC3.44□□□□□ -1.86
U3KQE9 RNU1-44P-201ENST00000384453 163 ntBASIC3.44□□□□□ -1.86
U3KQE9 MIR873-201ENST00000401120 77 ntBASIC3.44□□□□□ -1.86
U3KQE9 AL591034.1-201ENST00000407447 340 ntBASIC3.44□□□□□ -1.86
U3KQE9 RNU6-588P-201ENST00000410281 105 ntBASIC3.44□□□□□ -1.86
U3KQE9 SNORA74C-2-201ENST00000411179 201 ntBASIC3.44□□□□□ -1.86
U3KQE9 AC012671.1-201ENST00000451912 203 ntBASIC3.44□□□□□ -1.86
U3KQE9 AL645939.1-201ENST00000453429 797 ntBASIC3.44□□□□□ -1.86
U3KQE9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.44□□□□□ -1.86
U3KQE9 RNU7-116P-201ENST00000516940 62 ntBASIC3.44□□□□□ -1.86
U3KQE9 RNA5SP170-201ENST00000517150 101 ntBASIC3.44□□□□□ -1.86
U3KQE9 RPL23AP97-201ENST00000568955 471 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms