Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 RNU7-170P-201ENST00000459303 61 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 AP001324.2-201ENST00000461163 319 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 AC007215.1-201ENST00000464893 276 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 RPS27P26-201ENST00000494583 239 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 RPL7P47-201ENST00000497299 556 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 AC110768.1-201ENST00000509222 400 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 RNU2-53P-201ENST00000516257 147 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 RN7SKP49-201ENST00000516675 260 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-1271P-201ENST00000517049 105 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 MIR3923-201ENST00000579521 83 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 MIR4659A-201ENST00000580269 81 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 AC078899.3-201ENST00000599065 212 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 AC091152.2-201ENST00000591628 2569 ntBASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHA9Q9Y5H5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AL109809.4-201ENST00000603520 2185 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 Y_RNA.476-201ENST00000384347 108 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 U8.11-201ENST00000384699 133 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 U8.12-201ENST00000384701 133 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 MT-TW-201ENST00000387382 68 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 SNORD115-46-201ENST00000390982 71 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AC108059.2-201ENST00000434626 151 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 U8.18-201ENST00000459285 133 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AC010401.1-201ENST00000463867 348 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 RN7SL283P-201ENST00000489055 303 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AC006445.1-201ENST00000491925 405 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 IGKV2-23-201ENST00000518729 323 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AC079598.5-201ENST00000547460 117 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AL356575.1-201ENST00000603008 283 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AL137843.1-201ENST00000605078 385 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AC022149.2-201ENST00000621061 203 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 LINC02555-201ENST00000563933 1951 ntBASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHA9Q9Y5H5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 Y_RNA.40-201ENST00000362645 93 ntBASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-799P-201ENST00000363567 107 ntBASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 Y_RNA.518-201ENST00000384552 113 ntBASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-579P-201ENST00000516879 102 ntBASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-794P-201ENST00000517261 64 ntBASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 AL034555.1-201ENST00000604816 211 ntBASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 CR392039.5-201ENST00000623201 510 ntBASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHA9Q9Y5H5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 Y_RNA.105-201ENST00000363182 111 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 MIR186-201ENST00000384988 86 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 AL079342.1-201ENST00000401460 267 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 U3.39-201ENST00000408569 239 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 RNU6-121P-201ENST00000410525 99 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 HMGN2P31-201ENST00000432430 273 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 AL358232.1-201ENST00000448030 501 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 SNORD127-201ENST00000458892 86 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 RPL36AP48-201ENST00000485521 314 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 AC023157.2-201ENST00000540596 141 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 UBL5P4-201ENST00000562584 236 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 MIR5047-201ENST00000579212 100 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 MIR5695-201ENST00000579717 85 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 AC073410.2-201ENST00000603240 332 ntBASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.43□□□□□ -1.86
PCDHA9Q9Y5H5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms