Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 AL133412.1-201ENST00000380194 2992 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU1-75P-201ENST00000347264 129 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 U3.8-201ENST00000363675 217 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 Y_RNA.341-201ENST00000365341 102 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 Y_RNA.368-201ENST00000365547 113 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 Y_RNA.456-201ENST00000384232 111 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 U8.12-201ENST00000384701 133 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 MIR659-201ENST00000384963 97 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 MIR513A2-201ENST00000385249 127 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 MIR3065-201ENST00000390137 79 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU6-855P-201ENST00000410395 104 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU2-37P-201ENST00000410695 177 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 HLA-N-201ENST00000437516 135 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 AC074290.1-201ENST00000448883 135 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 RPL23AP70-201ENST00000483361 460 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 RN7SL812P-201ENST00000493791 279 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 AC231760.1-201ENST00000498002 260 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 AC006499.6-201ENST00000511169 607 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 SNORA70.12-201ENST00000516084 153 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 AC022616.8-201ENST00000533569 253 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 MIR5688-201ENST00000580619 83 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 DNAJC19P2-201ENST00000593340 302 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 RPL17P51-201ENST00000605218 238 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 MAPK10-253ENST00000641010 4072 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 AF127577.6-201ENST00000623352 2191 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 AC002546.1-201ENST00000588041 2504 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 AC100821.1-201ENST00000523153 2479 ntBASIC4.27□□□□□ -1.73
PCDHGA11Q9Y5H2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 AC069528.2-201ENST00000624849 1991 ntBASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 Y_RNA.337-201ENST00000365312 102 ntBASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 U1.1-201ENST00000384101 164 ntBASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU6-750P-201ENST00000390946 107 ntBASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 AC004866.1-201ENST00000411748 78 ntBASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 AC073264.2-201ENST00000448886 166 ntBASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 AL160290.3-201ENST00000604869 165 ntBASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU1-30P-201ENST00000606575 163 ntBASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 FAM27D1-201ENST00000612308 341 ntBASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 MIR6891-201ENST00000618788 93 ntBASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDHGA11Q9Y5H2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 AC134026.1-201ENST00000623249 2239 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU1-15P-201ENST00000353977 144 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 AL139281.1-201ENST00000422120 335 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 AC010099.1-201ENST00000455434 375 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 RN7SL354P-201ENST00000469282 294 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 AC146944.2-203ENST00000502493 354 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 AC139495.1-202ENST00000513164 354 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 HSPE1P18-201ENST00000517602 280 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 AP000867.2-201ENST00000532468 320 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 CYP4A43P-201ENST00000568156 121 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 AC024940.4-201ENST00000605507 246 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 AC083809.1-201ENST00000615051 472 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 AC006133.1-201ENST00000617106 264 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 AC008873.1-201ENST00000625051 138 ntBASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHGA11Q9Y5H2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 UBE3AP2-201ENST00000429033 2259 ntBASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 AC079741.1-201ENST00000321498 212 ntBASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU6-199P-201ENST00000362954 107 ntBASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU4-11P-201ENST00000365287 132 ntBASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 RNU1-57P-201ENST00000384491 166 ntBASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 MIR3074-201ENST00000384885 81 ntBASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 AC146507.2-201ENST00000460608 476 ntBASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 AP006289.1-201ENST00000538089 277 ntBASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 AC090616.3-201ENST00000582184 217 ntBASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 AC079587.1-201ENST00000603846 277 ntBASIC4.24□□□□□ -1.73
PCDHGA11Q9Y5H2 AL137843.1-201ENST00000605078 385 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms