Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 Y_RNA.706-201ENST00000516933 99 ntBASIC3.26□□□□□ -1.89
PCDHGA6Q9Y5G7 Y_RNA.711-201ENST00000516993 102 ntBASIC3.26□□□□□ -1.89
PCDHGA6Q9Y5G7 AC093331.1-201ENST00000521474 169 ntBASIC3.26□□□□□ -1.89
PCDHGA6Q9Y5G7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGA6Q9Y5G7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA6Q9Y5G7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA6Q9Y5G7 RPL23AP88-201ENST00000605759 454 ntBASIC3.26□□□□□ -1.89
PCDHGA6Q9Y5G7 AC083806.3-201ENST00000614016 455 ntBASIC3.26□□□□□ -1.89
PCDHGA6Q9Y5G7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGA6Q9Y5G7 MIR7112-201ENST00000616126 65 ntBASIC3.26□□□□□ -1.89
PCDHGA6Q9Y5G7 AC002064.3-201ENST00000623448 346 ntBASIC3.26□□□□□ -1.89
PCDHGA6Q9Y5G7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 RNU6-1210P-201ENST00000363775 107 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 RNU6-99P-201ENST00000364721 107 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 Y_RNA.326-201ENST00000365176 113 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 MIR186-201ENST00000384988 86 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 RNA5SP494-201ENST00000410653 129 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 AL590135.1-201ENST00000422215 156 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 AC019205.3-201ENST00000424573 156 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 AC008267.5-201ENST00000424928 265 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 AC016700.2-201ENST00000446011 156 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 AC015911.1-201ENST00000495111 156 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 ELOCP31-201ENST00000540463 467 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 AC103810.1-201ENST00000579873 453 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 SNORA43.4-201ENST00000629559 138 ntBASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PCDHGA6Q9Y5G7 Z83843.1-201ENST00000604070 3685 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 RNU5B-2P-201ENST00000363036 113 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 RNU6-137P-201ENST00000363680 108 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 SNORA68.1-201ENST00000364537 132 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 SNORA12.2-201ENST00000391040 156 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 MIR1289-1-201ENST00000408836 144 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 RNA5SP293-201ENST00000410527 113 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 AL358453.1-201ENST00000422522 250 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 AC012306.1-201ENST00000423267 114 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 AC091874.1-201ENST00000511402 339 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 SNORA31.6-201ENST00000516241 130 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 RN7SKP295-201ENST00000517264 153 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 AP003072.1-201ENST00000531740 145 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 MRPS36P4-201ENST00000534436 298 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 GNAI2P1-201ENST00000541815 315 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 AL138963.2-201ENST00000605137 226 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 AC091925.1-201ENST00000623204 462 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 AC243829.7-201ENST00000633081 225 ntBASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA6Q9Y5G7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 Y_RNA.39-201ENST00000362620 98 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 U3.13-201ENST00000364804 214 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 Y_RNA.314-201ENST00000365114 102 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 MIR153-2-201ENST00000385225 87 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 CBX3P9-201ENST00000402326 552 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 HMGB1P35-201ENST00000503360 598 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 AC110794.1-201ENST00000505816 425 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 SCARNA17.1-201ENST00000516211 143 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 SCARNA17.2-201ENST00000516334 143 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 MIR5004-201ENST00000579078 107 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 MIR3923-201ENST00000579521 83 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 AC006504.6-201ENST00000590142 199 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 SCARNA17.4-201ENST00000614296 143 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 SNORD98-201ENST00000636377 67 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 AC026241.1-201ENST00000517873 2142 ntBASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA6Q9Y5G7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 Y_RNA.111-201ENST00000363248 100 ntBASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 SNORA48.2-201ENST00000390926 124 ntBASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 MIR190B-201ENST00000401119 79 ntBASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 RNU6-1140P-201ENST00000410517 106 ntBASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 RPS26P42-201ENST00000413485 326 ntBASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 AC017079.2-201ENST00000416102 485 ntBASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 PMCHL1-202ENST00000423102 261 ntBASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 AC092423.1-201ENST00000430165 186 ntBASIC3.22□□□□□ -1.89
PCDHGA6Q9Y5G7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms