Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC243829.7-201ENST00000633081 225 ntBASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PCDHGA9Q9Y5G4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 Y_RNA.39-201ENST00000362620 98 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 U3.13-201ENST00000364804 214 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 Y_RNA.314-201ENST00000365114 102 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 MIR153-2-201ENST00000385225 87 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 CBX3P9-201ENST00000402326 552 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 DBIP2-201ENST00000419076 262 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 HMGB1P35-201ENST00000503360 598 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 TGIF1P1-201ENST00000558095 802 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 MIR3923-201ENST00000579521 83 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 AC006504.6-201ENST00000590142 199 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 SNORD98-201ENST00000636377 67 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 AC026241.1-201ENST00000517873 2142 ntBASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA9Q9Y5G4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 RNA5SP42-201ENST00000364278 115 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 SNORA48.5-201ENST00000391143 135 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 MIR190B-201ENST00000401119 79 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 RNU6-1140P-201ENST00000410517 106 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 RPS26P42-201ENST00000413485 326 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 PMCHL1-202ENST00000423102 261 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 AC092423.1-201ENST00000430165 186 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 AC009296.1-201ENST00000443146 155 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 AC087477.1-201ENST00000465747 340 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 AC090525.1-201ENST00000479116 478 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 AC096576.1-201ENST00000489014 359 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 AC021146.2-201ENST00000504736 556 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 FCF1P8-201ENST00000510322 597 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 RNU6-475P-201ENST00000516073 104 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 RNU2-53P-201ENST00000516257 147 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 MIR2355-201ENST00000517199 87 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 CYP4A27P-201ENST00000567218 190 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 MIR4325-201ENST00000583049 90 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 AC010620.2-201ENST00000600135 313 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 U4.6-201ENST00000621618 127 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 MIR7515-201ENST00000637837 67 ntBASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PCDHGA9Q9Y5G4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
PCDHGA9Q9Y5G4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
PCDHGA9Q9Y5G4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 Z83843.1-201ENST00000604070 3685 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AP002088.1-201ENST00000382740 395 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 SNORD21-201ENST00000383953 95 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 Y_RNA.405-201ENST00000383979 100 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 RNU6-1032P-201ENST00000384100 107 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 Y_RNA.451-201ENST00000384200 100 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 Y_RNA.524-201ENST00000384564 100 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 Y_RNA.561-201ENST00000384694 100 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 U6atac.2-201ENST00000408644 118 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AC017079.2-201ENST00000416102 485 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 MCFD2P1-201ENST00000417812 300 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AL590556.1-201ENST00000423231 483 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AIMP1P2-201ENST00000425294 312 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AC006028.1-201ENST00000438379 402 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AC010401.1-201ENST00000463867 348 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AC110794.1-201ENST00000505816 425 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 IGKV2-26-201ENST00000518305 343 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR5680-201ENST00000577577 84 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AL670379.2-201ENST00000604983 252 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AL137843.1-201ENST00000605078 385 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AC006157.1-201ENST00000611750 366 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 MIR7153-201ENST00000637758 57 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 AC099654.10-201ENST00000640395 161 ntBASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGA9Q9Y5G4 RNU5F-3P-201ENST00000363767 117 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 SNORA33.2-201ENST00000365413 134 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 RNU6-639P-201ENST00000384074 107 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 RNU6-17P-201ENST00000384245 107 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 RNU6-18P-201ENST00000384527 107 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 SNORA69.1-201ENST00000390904 137 ntBASIC3.2□□□□□ -1.9
PCDHGA9Q9Y5G4 U3.39-201ENST00000408569 239 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms