Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 AC005741.1-201ENST00000511094 432 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 AC090888.2-201ENST00000559765 1144 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 AL355816.2-201ENST00000610049 647 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 AC116165.2-201ENST00000616705 206 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 AC099654.9-201ENST00000637055 678 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 MIR3529-201ENST00000637713 78 ntBASIC-0.21□□□□□ -2.44
AP4S1Q9Y587 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 BX119904.4-201ENST00000424402 301 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 AC069257.2-201ENST00000441819 155 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 U7.7-201ENST00000459276 60 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 AL049830.1-201ENST00000468034 425 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 AC011406.1-201ENST00000512440 370 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 RNA5SP436-201ENST00000516020 115 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 RNU4-77P-201ENST00000516692 156 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 AC011195.1-201ENST00000578177 177 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 MIR4742-201ENST00000581069 85 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 MIR4290-201ENST00000583807 95 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 AC022709.1-201ENST00000615967 87 ntBASIC-0.22□□□□□ -2.44
AP4S1Q9Y587 RNU6-28P-201ENST00000362378 107 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 SNORA42.1-201ENST00000363515 137 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 RNU6-359P-201ENST00000365466 108 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 SUGT1P1-201ENST00000379514 476 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 SNORA75.2-201ENST00000391138 150 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 SNORA75.3-201ENST00000391231 150 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 MTND5P2-201ENST00000442927 1142 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 AC027338.1-201ENST00000514840 825 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 MTATP6P9-201ENST00000515039 680 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 MIR449C-201ENST00000516047 92 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 RNU6-922P-201ENST00000516753 99 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 AC133794.1-201ENST00000602731 914 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 AL513534.2-201ENST00000603836 250 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 MIR4315-1-201ENST00000636800 73 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 MIR4315-2-201ENST00000640925 73 ntBASIC-0.23□□□□□ -2.45
AP4S1Q9Y587 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 RNA5SP432-201ENST00000362480 116 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 MIR140-201ENST00000385282 100 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 MTCO2P31-201ENST00000402702 684 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 ARL5AP1-201ENST00000418991 388 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 RPL31P35-201ENST00000431058 377 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 LARP1BP3-201ENST00000437229 869 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 NFU1P2-201ENST00000448700 469 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 HESX1-202ENST00000473921 757 ntTSL 5 BASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 TMEM251P1-201ENST00000503717 318 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 AK3P2-201ENST00000507976 429 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 SNRPGP20-201ENST00000604477 205 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 AL031775.1-201ENST00000607014 887 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 7SK.10-201ENST00000621414 298 ntBASIC-0.24□□□□□ -2.45
AP4S1Q9Y587 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 AC092268.1-201ENST00000342691 405 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 RNU6-212P-201ENST00000362642 104 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 RNA5SP214-201ENST00000363378 118 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 SNORD116-13-201ENST00000384408 92 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 RNY1P14-201ENST00000384426 108 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 MTND1P9-201ENST00000453775 944 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 RNU7-34P-201ENST00000459394 64 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 HMGN1P12-201ENST00000499125 195 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 AC093809.1-201ENST00000509155 340 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 RNU6-714P-201ENST00000516963 103 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 AC104229.1-201ENST00000561364 255 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 MTND4P5-201ENST00000435821 1374 ntBASIC-0.25□□□□□ -2.45
AP4S1Q9Y587 SNORA32.1-201ENST00000364514 115 ntBASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 RNU6-815P-201ENST00000384080 113 ntBASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 AL359704.1-201ENST00000411586 781 ntBASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 MTND1P21-201ENST00000412991 285 ntBASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 RPL39P6-201ENST00000448289 150 ntBASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.26□□□□□ -2.45
AP4S1Q9Y587 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms