Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RPL23AP50-201ENST00000434149 455 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.8□□□□□ -1.96
PKP3Q9Y446 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.8□□□□□ -1.96
PKP3Q9Y446 SNRPGP7-201ENST00000469016 106 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 FO393415.2-201ENST00000480085 343 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 AC005741.1-201ENST00000511094 432 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 SCARNA16.2-201ENST00000516520 172 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 RNA5SP384-201ENST00000516615 116 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 Y_RNA.701-201ENST00000516812 110 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.8□□□□□ -1.96
PKP3Q9Y446 AC105137.2-201ENST00000569073 466 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.8□□□□□ -1.96
PKP3Q9Y446 MIR3605-201ENST00000583214 100 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 AC011471.1-201ENST00000585766 187 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 AC008739.2-201ENST00000597006 317 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 AL356157.2-201ENST00000605122 111 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 AC090971.5-201ENST00000621102 293 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 AC092608.2-201ENST00000624427 218 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 AL137790.1-201ENST00000634283 177 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PKP3Q9Y446 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PKP3Q9Y446 AC099654.7-201ENST00000635788 2127 ntBASIC2.8□□□□□ -1.96
PKP3Q9Y446 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.8□□□□□ -1.96
PKP3Q9Y446 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.79□□□□□ -1.96
PKP3Q9Y446 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.79□□□□□ -1.96
PKP3Q9Y446 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.79□□□□□ -1.96
PKP3Q9Y446 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PKP3Q9Y446 RNU6-1222P-201ENST00000384615 107 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 RNU6-331P-201ENST00000384724 107 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 AL590004.2-201ENST00000404787 371 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 RNU6-1140P-201ENST00000410517 106 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.79□□□□□ -1.96
PKP3Q9Y446 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.79□□□□□ -1.96
PKP3Q9Y446 AL031659.1-201ENST00000447075 539 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 RPL39P29-201ENST00000447779 157 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.79□□□□□ -1.96
PKP3Q9Y446 RPL30P12-201ENST00000474666 353 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 AC027575.1-201ENST00000481064 460 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.79□□□□□ -1.96
PKP3Q9Y446 AC091826.1-201ENST00000514065 313 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.79□□□□□ -1.96
PKP3Q9Y446 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.79□□□□□ -1.96
PKP3Q9Y446 AC093249.1-201ENST00000567049 203 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PKP3Q9Y446 HMGB1P24-202ENST00000615653 685 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 AC007792.1-201ENST00000623023 402 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 MIR6733-201ENST00000635723 61 ntBASIC2.79□□□□□ -1.96
PKP3Q9Y446 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
PKP3Q9Y446 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.79□□□□□ -1.96
PKP3Q9Y446 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PKP3Q9Y446 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
PKP3Q9Y446 AC002543.1-201ENST00000299783 1954 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PKP3Q9Y446 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PKP3Q9Y446 SNORD114-19-201ENST00000363072 75 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 RNU6-1141P-201ENST00000364520 107 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 SNORD32A-201ENST00000364805 84 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 Y_RNA.394-201ENST00000383942 103 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 RNU6-1083P-201ENST00000384022 107 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 RNU6-784P-201ENST00000384330 106 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 RNU6-1011P-201ENST00000384668 107 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 AL512633.1-201ENST00000399931 655 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 BX276092.3-201ENST00000424182 230 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 MTCO2P12-201ENST00000427426 682 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 AC087499.2-201ENST00000432861 149 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 AC007677.1-201ENST00000445757 515 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 AC003982.1-202ENST00000469928 248 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 RPL31P41-201ENST00000477967 372 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.78□□□□□ -1.96
PKP3Q9Y446 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.78□□□□□ -1.96
PKP3Q9Y446 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.78□□□□□ -1.96
PKP3Q9Y446 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
PKP3Q9Y446 AL356055.1-201ENST00000602528 446 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 CYP2C61P-201ENST00000604072 290 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 AC107871.2-201ENST00000612894 502 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 MTND5P9-201ENST00000503854 1755 ntBASIC2.78□□□□□ -1.96
PKP3Q9Y446 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.78□□□□□ -1.96
PKP3Q9Y446 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PKP3Q9Y446 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.78□□□□□ -1.96
PKP3Q9Y446 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 AL109809.4-201ENST00000603520 2185 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PKP3Q9Y446 SNORD50.1-201ENST00000362987 71 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 RNU6-1040P-201ENST00000383974 107 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 SNORA18.3-201ENST00000384122 132 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 U3.26-201ENST00000391236 204 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 AL031121.1-201ENST00000406553 254 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 SNORD88.1-201ENST00000408684 91 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 EIF1AXP1-201ENST00000419267 435 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 RPL23AP95-201ENST00000426806 265 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.77□□□□□ -1.97
PKP3Q9Y446 AL135938.1-201ENST00000443141 297 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 Z96811.1-201ENST00000445880 108 ntBASIC2.77□□□□□ -1.97
PKP3Q9Y446 SCARNA17.1-201ENST00000516211 143 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms