Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 AL139415.2-201ENST00000431968 163 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 MTND1P30-201ENST00000441241 901 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 AL353705.4-201ENST00000449661 238 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 TOMM22P6-201ENST00000465035 409 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 RPL38P4-201ENST00000502376 214 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 RBBP4P6-201ENST00000508098 202 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 RNU6-377P-201ENST00000515965 102 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 RN7SKP287-201ENST00000516546 266 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 RNU5F-4P-201ENST00000516581 114 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 MIR4999-201ENST00000585029 91 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 AC093424.1-201ENST00000604999 338 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 TUSC7.1-201ENST00000610969 165 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 AC095038.3-201ENST00000634439 195 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
CHTOPQ9Y3Y2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AP000568.1-201ENST00000282964 442 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 RNU6-179P-201ENST00000363350 107 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 RNU1-42P-201ENST00000364033 160 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 RNU6-39P-201ENST00000384344 107 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 COX6CP10-201ENST00000416832 224 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AC003989.2-201ENST00000440224 169 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AC096638.1-201ENST00000444678 216 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AL606662.1-201ENST00000445763 553 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 HSPE1P13-201ENST00000451143 297 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 snoU13.27-201ENST00000459278 104 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 RPS26P45-201ENST00000471748 340 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 MTND3P25-201ENST00000509243 135 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 Y_RNA.675-201ENST00000516389 149 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 MTATP6P24-201ENST00000576835 677 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 MIR3923-201ENST00000579521 83 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AC008521.1-201ENST00000587471 187 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AC008752.3-201ENST00000588113 712 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AL031281.1-201ENST00000604049 488 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AC063944.3-201ENST00000609969 533 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AL031667.3-201ENST00000620124 655 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 Z69720.2-201ENST00000624755 279 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.12□□□□□ -2.23
CHTOPQ9Y3Y2 AL391994.1-201ENST00000254724 282 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 RNU6-862P-201ENST00000362804 105 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 U8.2-201ENST00000363156 134 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 U3.9-201ENST00000363823 204 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 RNU1-96P-201ENST00000364163 162 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 RNY1P12-201ENST00000364251 105 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 RNU6-1200P-201ENST00000384162 107 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 MIR9-3-201ENST00000385084 90 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 MIR320A-201ENST00000385302 82 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AC010099.3-201ENST00000423896 409 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AC245047.4-201ENST00000433189 144 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AC015922.2-201ENST00000435593 184 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AC007395.1-201ENST00000451333 677 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 RNU7-14P-201ENST00000459331 62 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AC068587.2-201ENST00000478386 781 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 HSPE1P23-201ENST00000509838 286 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 ATP5EP1-201ENST00000510257 156 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AC074344.1-201ENST00000512823 224 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 MTCO3P28-201ENST00000513351 515 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 RN7SKP88-201ENST00000516847 250 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 Y_RNA.717-201ENST00000517106 92 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 RNA5SP404-201ENST00000517118 132 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AP003461.1-201ENST00000528866 78 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AL512310.8-201ENST00000550183 120 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 MIR1273D-201ENST00000577266 86 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AP003465.2-201ENST00000602571 373 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 MIR3976-201ENST00000606807 139 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 7SK.8-201ENST00000612110 250 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 7SK.11-201ENST00000615477 250 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 AC012676.2-201ENST00000619258 186 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 7SK.13-201ENST00000622040 250 ntBASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.11□□□□□ -2.23
CHTOPQ9Y3Y2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHTOPQ9Y3Y2 RNU1-22P-201ENST00000363334 158 ntBASIC1.1□□□□□ -2.23
CHTOPQ9Y3Y2 SNORD31B-201ENST00000364977 69 ntBASIC1.1□□□□□ -2.23
CHTOPQ9Y3Y2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHTOPQ9Y3Y2 RNU6-331P-201ENST00000384724 107 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 287.8 ms