Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.87□□□□□ -2.11
RNF6Q9Y252 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.87□□□□□ -2.11
RNF6Q9Y252 AL354950.2-201ENST00000617939 290 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
RNF6Q9Y252 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RNF6Q9Y252 RNU6-266P-201ENST00000364225 107 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 RNU6-336P-201ENST00000364891 107 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 RNU6-692P-201ENST00000384496 107 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 MIR518A2-201ENST00000384966 87 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 MIR17-201ENST00000385012 84 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 BTF3L4P2-201ENST00000392798 346 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 GPM6BP3-201ENST00000442797 145 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 AL360221.1-201ENST00000445989 335 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 RPL31P3-201ENST00000458430 332 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.86□□□□□ -2.11
RNF6Q9Y252 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.86□□□□□ -2.11
RNF6Q9Y252 AK3P2-201ENST00000507976 429 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.86□□□□□ -2.11
RNF6Q9Y252 RNU5F-2P-201ENST00000516066 82 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 RNA5SP458-201ENST00000516188 119 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.86□□□□□ -2.11
RNF6Q9Y252 AL137161.1-201ENST00000532231 390 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 AC022616.8-201ENST00000533569 253 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 AC022880.1-201ENST00000534017 973 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.86□□□□□ -2.11
RNF6Q9Y252 HIF1AP1-201ENST00000553642 175 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.86□□□□□ -2.11
RNF6Q9Y252 AGGF1P4-201ENST00000568249 801 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.86□□□□□ -2.11
RNF6Q9Y252 AC010620.1-201ENST00000601088 1102 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 U2.17-201ENST00000611454 95 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RNF6Q9Y252 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.86□□□□□ -2.11
RNF6Q9Y252 ZNF702P-202ENST00000434269 1966 ntBASIC1.86□□□□□ -2.11
RNF6Q9Y252 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RNF6Q9Y252 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RNF6Q9Y252 RNU6-996P-201ENST00000365438 107 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 RNU6-827P-201ENST00000365553 106 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 RNU2-48P-201ENST00000410694 191 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 USP9YP18-201ENST00000425912 695 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 AC027124.2-201ENST00000428249 105 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.85□□□□□ -2.11
RNF6Q9Y252 DNAJC19P4-201ENST00000440115 345 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.85□□□□□ -2.11
RNF6Q9Y252 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.85□□□□□ -2.11
RNF6Q9Y252 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.85□□□□□ -2.11
RNF6Q9Y252 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.85□□□□□ -2.11
RNF6Q9Y252 PRELID3BP1-201ENST00000457142 540 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 PMCHL2-203ENST00000457791 237 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.85□□□□□ -2.11
RNF6Q9Y252 SNORA25.17-201ENST00000517184 124 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 AC115990.1-201ENST00000526957 301 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.85□□□□□ -2.11
RNF6Q9Y252 AC103996.1-201ENST00000555468 102 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 AC011494.1-201ENST00000596454 237 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 AL391646.1-201ENST00000603860 190 ntBASIC1.85□□□□□ -2.11
RNF6Q9Y252 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
RNF6Q9Y252 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RNF6Q9Y252 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
RNF6Q9Y252 CENPCP1-201ENST00000533085 2578 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 Y_RNA.1-201ENST00000352915 104 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 RNU6-611P-201ENST00000384276 104 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 SNORD37.1-201ENST00000390968 65 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 SNORA26.9-201ENST00000391322 122 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 CDK8P2-201ENST00000415020 547 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 AC096920.1-201ENST00000423991 241 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.84□□□□□ -2.11
RNF6Q9Y252 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.84□□□□□ -2.11
RNF6Q9Y252 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.84□□□□□ -2.11
RNF6Q9Y252 AC007677.1-201ENST00000445757 515 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.84□□□□□ -2.11
RNF6Q9Y252 AC079140.5-201ENST00000507882 310 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RNF6Q9Y252 AC079140.3-201ENST00000511111 550 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 MTND3P5-201ENST00000512798 333 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.84□□□□□ -2.11
RNF6Q9Y252 AC069113.1-201ENST00000517763 267 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 AC103987.3-201ENST00000582071 292 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 MIR3611-201ENST00000584484 83 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 RNU6-85P-201ENST00000605989 107 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 AL162373.1-201ENST00000620433 407 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 YWHAEP7-203ENST00000622054 312 ntBASIC1.84□□□□□ -2.11
RNF6Q9Y252 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
RNF6Q9Y252 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
RNF6Q9Y252 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RNF6Q9Y252 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
RNF6Q9Y252 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RNF6Q9Y252 RNU6-43P-201ENST00000384302 107 ntBASIC1.83□□□□□ -2.12
RNF6Q9Y252 MIR583-201ENST00000384846 75 ntBASIC1.83□□□□□ -2.12
RNF6Q9Y252 SNORA40.19-201ENST00000390846 128 ntBASIC1.83□□□□□ -2.12
RNF6Q9Y252 AL606923.1-201ENST00000406616 190 ntBASIC1.83□□□□□ -2.12
RNF6Q9Y252 MIR1262-201ENST00000408276 93 ntBASIC1.83□□□□□ -2.12
RNF6Q9Y252 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
RNF6Q9Y252 AL139156.1-201ENST00000412785 841 ntBASIC1.83□□□□□ -2.12
RNF6Q9Y252 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms