Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC079140.3-201ENST00000511111 550 ntBASIC0.13□□□□□ -2.39
SHANK2Q9UPX8 MTND5P13-201ENST00000513046 1079 ntBASIC0.13□□□□□ -2.39
SHANK2Q9UPX8 SNORA31.2-201ENST00000516019 134 ntBASIC0.13□□□□□ -2.39
SHANK2Q9UPX8 RNA5SP255-201ENST00000516370 107 ntBASIC0.13□□□□□ -2.39
SHANK2Q9UPX8 AC098483.2-201ENST00000603158 454 ntBASIC0.13□□□□□ -2.39
SHANK2Q9UPX8 AC093913.1-201ENST00000614178 329 ntBASIC0.13□□□□□ -2.39
SHANK2Q9UPX8 Y_RNA.35-201ENST00000362601 101 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 RNU4-79P-201ENST00000362764 141 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 RNU6-1078P-201ENST00000364522 103 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 SNX3P1X-201ENST00000414887 175 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 AL139421.1-201ENST00000423010 169 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 MTATP6P30-201ENST00000443540 664 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 AC048334.1-201ENST00000477975 159 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 AC113410.1-201ENST00000505029 247 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 RNU6-927P-201ENST00000516199 100 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 AC107304.1-201ENST00000604229 296 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 BNIP3P31-201ENST00000604515 566 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 AL451064.1-201ENST00000607718 471 ntBASIC0.12□□□□□ -2.39
SHANK2Q9UPX8 RNU6-512P-201ENST00000364438 103 ntBASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 AL133264.1-201ENST00000407157 562 ntBASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 MTCO3P1-205ENST00000422088 832 ntBASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 HMGB1P30-201ENST00000492455 606 ntBASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 RN7SKP256-201ENST00000517201 314 ntBASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 AC104417.1-201ENST00000523974 751 ntBASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 AC093012.1-202ENST00000549403 582 ntBASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 AC137800.2-201ENST00000574375 120 ntBASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 AC017083.3-201ENST00000609955 700 ntBASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 AC019226.1-201ENST00000625666 515 ntBASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.11□□□□□ -2.39
SHANK2Q9UPX8 MIR411-201ENST00000362239 96 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AL035398.1-201ENST00000430869 322 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AC016717.1-201ENST00000448918 286 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 RNU1-131P-201ENST00000458943 161 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 RNA5SP135-201ENST00000517019 125 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 DPPA3P3-201ENST00000603842 430 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AC105148.1-201ENST00000604961 409 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AC091946.2-201ENST00000606105 291 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 RNU6-87P-201ENST00000607561 108 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AC084824.4-201ENST00000620106 731 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 RNA5SP259-201ENST00000365541 109 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 RNU1-119P-201ENST00000391122 165 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 RNA5SP111-201ENST00000411386 101 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 ISCA1P1-201ENST00000426679 387 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 TXNL1P1-201ENST00000429528 554 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 SNORA68.3-201ENST00000515906 83 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AF038458.1-201ENST00000588406 262 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 AC078795.2-201ENST00000602835 1252 ntBASIC0.1□□□□□ -2.39
SHANK2Q9UPX8 LINC02555-201ENST00000563933 1951 ntBASIC0.09□□□□□ -2.39
SHANK2Q9UPX8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
SHANK2Q9UPX8 AC010615.1-201ENST00000594254 1764 ntBASIC0.09□□□□□ -2.39
SHANK2Q9UPX8 RNU6-1010P-201ENST00000362757 107 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 RNU6-188P-201ENST00000364207 107 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 SNORA27.3-201ENST00000364937 134 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 RNU6-1335P-201ENST00000365426 107 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 RNU6-969P-201ENST00000383900 105 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 UBE2V1P11-201ENST00000411559 285 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 BX119904.4-201ENST00000424402 301 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 AL353752.1-201ENST00000454946 260 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 MTND1P3-201ENST00000484956 952 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 AC022493.2-201ENST00000506122 481 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 AP003049.1-201ENST00000529418 457 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 AC093027.1-201ENST00000546698 429 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 AC090615.1-201ENST00000577519 154 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 MIR4782-201ENST00000577987 79 ntBASIC0.09□□□□□ -2.4
SHANK2Q9UPX8 snoU2_19.1-201ENST00000362361 80 ntBASIC0.08□□□□□ -2.4
SHANK2Q9UPX8 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
SHANK2Q9UPX8 RNU6-223P-201ENST00000362830 107 ntBASIC0.08□□□□□ -2.4
SHANK2Q9UPX8 U3.9-201ENST00000363823 204 ntBASIC0.08□□□□□ -2.4
SHANK2Q9UPX8 Y_RNA.363-201ENST00000365529 113 ntBASIC0.08□□□□□ -2.4
SHANK2Q9UPX8 MIR153-2-201ENST00000385225 87 ntBASIC0.08□□□□□ -2.4
SHANK2Q9UPX8 HMGN2P22-201ENST00000427588 175 ntBASIC0.08□□□□□ -2.4
SHANK2Q9UPX8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.08□□□□□ -2.4
SHANK2Q9UPX8 BRK1P2-201ENST00000442875 223 ntBASIC0.08□□□□□ -2.4
SHANK2Q9UPX8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.08□□□□□ -2.4
SHANK2Q9UPX8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms