Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNA5SP54-201ENST00000516951 92 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 SUMO2P18-201ENST00000518873 252 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 AL133393.1-201ENST00000603277 287 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 AC112200.1-201ENST00000625015 234 ntBASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
AP4E1Q9UPM8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 MAPK10-373ENST00000641983 6772 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 RNU6-1272P-201ENST00000362776 107 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 RNU6-1290P-201ENST00000362957 109 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 RNU6-884P-201ENST00000363889 107 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 RNU6-735P-201ENST00000410612 107 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 RPL21P66-201ENST00000426566 466 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 RAB28P5-201ENST00000427490 651 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 AC244670.1-201ENST00000436879 112 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 HMGB3P8-201ENST00000449709 577 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 RNU6-625P-201ENST00000459412 107 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 AC005921.1-201ENST00000510589 286 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 AC018448.1-201ENST00000552843 316 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 AL360157.1-201ENST00000565962 87 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 AC020914.4-201ENST00000597690 277 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 AL359198.2-201ENST00000611836 194 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 AC068831.7-201ENST00000616954 363 ntBASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
AP4E1Q9UPM8 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 Y_RNA.81-201ENST00000362997 102 ntBASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 RNU6-1199P-201ENST00000411249 104 ntBASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 AL121594.1-201ENST00000475906 575 ntBASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 RAC1P2-201ENST00000511164 579 ntBASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 RNA5SP208-201ENST00000516156 78 ntBASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 AC022695.1-201ENST00000522089 237 ntBASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 MIR4286-201ENST00000580651 93 ntBASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 AL137849.1-201ENST00000604767 169 ntBASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 AC091953.5-201ENST00000622919 233 ntBASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 AC091932.3-201ENST00000624223 323 ntBASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 MTND5P35-201ENST00000557537 1720 ntBASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.97□□□□□ -1.77
AP4E1Q9UPM8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
AP4E1Q9UPM8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
AP4E1Q9UPM8 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
AP4E1Q9UPM8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 SNORA31-201ENST00000362607 130 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 RNU6-1285P-201ENST00000363480 105 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 RNU5F-3P-201ENST00000363767 117 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 SNORA72.2-201ENST00000365028 127 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 U1.1-201ENST00000384101 164 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.497-201ENST00000384447 98 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 Y_RNA.568-201ENST00000384742 113 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 NDUFS5P4-201ENST00000412983 318 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 AL162725.1-201ENST00000435405 301 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 RPS15AP5-201ENST00000436276 388 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 RPL30P12-201ENST00000474666 353 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 TRBV12-2-201ENST00000489763 344 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 RN7SL323P-201ENST00000494712 295 ntBASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.96□□□□□ -1.78
AP4E1Q9UPM8 CYCSP23-201ENST00000519781 313 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms