Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 RNU6-293P-201ENST00000411259 106 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AL445685.2-201ENST00000422551 342 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 RPL7P54-201ENST00000438336 674 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.94□□□□□ -2.1
SPASTQ9UBP0 SCARNA18-201ENST00000459004 134 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 RNU6-333P-201ENST00000459117 107 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.94□□□□□ -2.1
SPASTQ9UBP0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.94□□□□□ -2.1
SPASTQ9UBP0 MTND3P5-201ENST00000512798 333 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AP005435.4-201ENST00000529514 284 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 RSL24D1P11-201ENST00000591045 491 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AP000654.2-201ENST00000605633 586 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AC063943.3-201ENST00000615562 356 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AC008147.4-201ENST00000617570 1204 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.94□□□□□ -2.1
SPASTQ9UBP0 MTND4P14-201ENST00000435799 1354 ntBASIC1.94□□□□□ -2.1
SPASTQ9UBP0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SPASTQ9UBP0 AC233981.2-201ENST00000611524 1614 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 RNU1-58P-201ENST00000362413 163 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 Y_RNA.399-201ENST00000383955 105 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 RNU6-142P-201ENST00000384019 107 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 RNU11-3P-201ENST00000391111 133 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 EIF4EP2-201ENST00000422816 654 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 MTCO2P11-201ENST00000431069 680 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 ARL2BPP4-201ENST00000506854 471 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 RNU6-430P-201ENST00000517078 107 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AC069113.1-201ENST00000517763 267 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AP005639.2-201ENST00000527592 928 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AC008088.1-201ENST00000580993 280 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AL078605.1-201ENST00000603529 500 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 CYP2C61P-201ENST00000604072 290 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AL034555.1-201ENST00000604816 211 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AC087752.4-201ENST00000605911 462 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 MIR6845-201ENST00000613182 61 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 DUXAP9-208ENST00000622815 614 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AC005609.4-201ENST00000625071 447 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.93□□□□□ -2.1
SPASTQ9UBP0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.93□□□□□ -2.1
SPASTQ9UBP0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 RNU6-336P-201ENST00000364891 107 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 SNORA16.2-201ENST00000390991 127 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 RPS29P13-201ENST00000402041 169 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AL357139.1-201ENST00000407792 426 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 MTATP6P18-201ENST00000417994 673 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 BX510359.4-201ENST00000423750 193 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 UBE2V1P4-201ENST00000425374 344 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC078809.1-201ENST00000427601 140 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 RPS27AP8-201ENST00000452665 445 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 SNRPFP3-201ENST00000457792 225 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 BET1P1-201ENST00000482276 359 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC093259.1-201ENST00000509755 300 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC010493.1-201ENST00000513479 292 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 SNORA25.17-201ENST00000517184 124 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC110588.1-201ENST00000559699 137 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 BNIP3P25-201ENST00000596023 559 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC025449.1-201ENST00000603896 529 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AL022345.1-201ENST00000607292 135 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 AC073114.1-201ENST00000612027 490 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SPASTQ9UBP0 ZNF680P1-201ENST00000436625 1469 ntBASIC1.92□□□□□ -2.1
SPASTQ9UBP0 RNU6-1164P-201ENST00000364428 107 ntBASIC1.91□□□□□ -2.1
SPASTQ9UBP0 RNU4-56P-201ENST00000364700 142 ntBASIC1.91□□□□□ -2.1
SPASTQ9UBP0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SPASTQ9UBP0 RNU6-43P-201ENST00000384302 107 ntBASIC1.91□□□□□ -2.1
SPASTQ9UBP0 RNU6-517P-201ENST00000384362 110 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms