Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 AC246785.4-201ENST00000605374 287 ntBASIC1.38□□□□□ -2.19
CCDC59Q9P031 AC091304.6-201ENST00000619761 202 ntBASIC1.38□□□□□ -2.19
CCDC59Q9P031 AC022513.1-201ENST00000624512 117 ntBASIC1.38□□□□□ -2.19
CCDC59Q9P031 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.37□□□□□ -2.19
CCDC59Q9P031 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC59Q9P031 RNU6-661P-201ENST00000362409 107 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 U3.4-201ENST00000363352 213 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 RNU4-48P-201ENST00000365559 182 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 RNU5A-2P-201ENST00000384337 116 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 SNORD70.1-201ENST00000391007 85 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 MTCYBP2-201ENST00000407745 171 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 RNA5SP425-201ENST00000410336 112 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC59Q9P031 DPH3P2-201ENST00000422618 250 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 AL365203.2-201ENST00000423444 196 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC59Q9P031 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC59Q9P031 HMGB1P18-201ENST00000438801 619 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 AL133217.1-201ENST00000450980 425 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC59Q9P031 SNORD42A-201ENST00000459584 64 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.37□□□□□ -2.19
CCDC59Q9P031 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 LRRC34P2-201ENST00000514850 553 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 AP005597.4-201ENST00000526762 229 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.37□□□□□ -2.19
CCDC59Q9P031 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC59Q9P031 HSPE1P4-201ENST00000550617 308 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 SUB1P4-201ENST00000566062 339 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 AC109446.1-201ENST00000566172 220 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC59Q9P031 AC012507.3-201ENST00000603556 477 ntBASIC1.37□□□□□ -2.19
CCDC59Q9P031 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CCDC59Q9P031 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC59Q9P031 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.36□□□□□ -2.19
CCDC59Q9P031 RNU1-42P-201ENST00000364033 160 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 RNU4-56P-201ENST00000364700 142 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 RNU6-282P-201ENST00000365357 103 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 Y_RNA.480-201ENST00000384364 102 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 RNU6-434P-201ENST00000384376 107 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 RNU6-456P-201ENST00000384493 107 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 MT-TH-201ENST00000387441 69 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CCDC59Q9P031 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC59Q9P031 BX295541.1-201ENST00000417774 250 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 AC123900.1-201ENST00000420390 96 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 SDAD1P3-201ENST00000427380 333 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 VN1R108P-201ENST00000431580 830 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 AL031274.1-201ENST00000450334 232 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC59Q9P031 RNU1-131P-201ENST00000458943 161 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 AC005908.1-201ENST00000468701 347 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 AL049873.1-201ENST00000480540 376 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 AC079382.1-201ENST00000493346 557 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 MTCYBP35-201ENST00000503630 1137 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 YWHAEP4-201ENST00000505390 198 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC59Q9P031 RNU2-69P-201ENST00000516061 100 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 Y_RNA.675-201ENST00000516389 149 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 AC060788.1-201ENST00000521318 469 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC59Q9P031 AC008269.2-201ENST00000561915 1105 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 VN1R107P-201ENST00000601784 209 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC59Q9P031 MIR8074-201ENST00000615081 81 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 uc_338.11-201ENST00000619132 160 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
CCDC59Q9P031 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
CCDC59Q9P031 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.35□□□□□ -2.19
CCDC59Q9P031 WWP1P1-201ENST00000466609 2769 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 SNORD32A-201ENST00000364805 84 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 RNU6-1127P-201ENST00000384580 107 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 SNORA16.2-201ENST00000390991 127 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 RPS29P13-201ENST00000402041 169 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 SNORA11.1-201ENST00000408133 129 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 RN7SKP61-201ENST00000410642 295 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 MTCO3P41-201ENST00000414801 328 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC59Q9P031 Z98742.3-201ENST00000418637 326 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 AL117339.3-201ENST00000418733 162 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 AC078809.1-201ENST00000427601 140 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 SNRPEP8-201ENST00000442866 260 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC59Q9P031 MTND1P18-201ENST00000448191 573 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC59Q9P031 SNRPGP9-201ENST00000456025 225 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 AC092436.1-201ENST00000506450 503 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC59Q9P031 ATP5EP1-201ENST00000510257 156 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 MTCO3P28-201ENST00000513351 515 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 SNORA25.17-201ENST00000517184 124 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC59Q9P031 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC59Q9P031 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.35□□□□□ -2.19
CCDC59Q9P031 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC59Q9P031 AC002044.1-201ENST00000606707 158 ntBASIC1.35□□□□□ -2.19
CCDC59Q9P031 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
CCDC59Q9P031 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CCDC59Q9P031 FGF7P2-201ENST00000332473 296 ntBASIC1.34□□□□□ -2.19
CCDC59Q9P031 MIR340-201ENST00000362125 95 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms