Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF38Q9H0F5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF38Q9H0F5 RNU6-527P-201ENST00000363425 104 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 Y_RNA.464-201ENST00000384282 110 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 RNU6-843P-201ENST00000384454 104 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 UBA52P6-201ENST00000399822 382 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 MTHFD2P2-201ENST00000407725 247 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 COX6CP10-201ENST00000416832 224 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 SETP5-201ENST00000437270 562 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 CYCSP32-201ENST00000440548 321 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 RPL23AP49-201ENST00000492925 468 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF38Q9H0F5 AC010265.1-201ENST00000513509 211 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 RN7SKP209-201ENST00000516888 304 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 H3F3AP1-201ENST00000559984 334 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 U2.21-201ENST00000637295 81 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 AC241585.2-209ENST00000638217 143 ntBASIC3.73□□□□□ -1.81
RNF38Q9H0F5 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF38Q9H0F5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF38Q9H0F5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF38Q9H0F5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF38Q9H0F5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
RNF38Q9H0F5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF38Q9H0F5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNF38Q9H0F5 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF38Q9H0F5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF38Q9H0F5 RNU4-90P-201ENST00000362773 141 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 RNU6-105P-201ENST00000363909 104 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 Y_RNA.286-201ENST00000364813 102 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 RNU1-73P-201ENST00000383971 164 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 RNVU1-14-201ENST00000384770 164 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 MIR32-201ENST00000384965 70 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RNF38Q9H0F5 AL033519.2-201ENST00000403958 392 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 SNORA11.1-201ENST00000408133 129 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 RNU4-30P-201ENST00000410245 143 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 RPL26P27-201ENST00000414397 437 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 RPL37P4-201ENST00000448908 268 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 RNU7-120P-201ENST00000459334 63 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 RN7SL93P-201ENST00000463035 293 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 RPL23AP75-201ENST00000491601 451 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 AC074198.2-201ENST00000508153 258 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 Y_RNA.703-201ENST00000516846 111 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 RNU6-703P-201ENST00000516946 107 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF38Q9H0F5 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 U4.6-201ENST00000621618 127 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RNF38Q9H0F5 SCARNA4-202ENST00000625402 129 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 AC244205.2-202ENST00000635781 342 ntBASIC3.72□□□□□ -1.81
RNF38Q9H0F5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF38Q9H0F5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
RNF38Q9H0F5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF38Q9H0F5 Y_RNA.44-201ENST00000362676 108 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 RNU1-18P-201ENST00000363062 164 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 RNU6-778P-201ENST00000363269 103 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 RNA5SP50-201ENST00000363731 107 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 RNU6-378P-201ENST00000384324 107 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 RNU6-125P-201ENST00000384505 107 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 RNU6-658P-201ENST00000384606 106 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF38Q9H0F5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF38Q9H0F5 MTATP6P7-201ENST00000453315 681 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 RPL26P9-201ENST00000457466 433 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AC008155.2-201ENST00000464337 397 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AP000870.1-201ENST00000472927 406 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AC025518.1-201ENST00000479856 347 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 RPL30P1-201ENST00000488676 339 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 BTF3L4P4-201ENST00000506381 449 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AC091874.1-201ENST00000511402 339 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF38Q9H0F5 RNU6-861P-201ENST00000516745 106 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AC022559.1-201ENST00000520905 205 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AP006245.1-201ENST00000522549 120 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF38Q9H0F5 MIR5047-201ENST00000579212 100 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AC096577.2-201ENST00000611455 153 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AC092628.2-201ENST00000622492 339 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 SCARNA4-201ENST00000629045 128 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 AL049781.1-201ENST00000623195 3585 ntBASIC3.71□□□□□ -1.82
RNF38Q9H0F5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.71□□□□□ -1.82
RNF38Q9H0F5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNF38Q9H0F5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RNF38Q9H0F5 AL079305.1-201ENST00000623159 3008 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 RNA5SP361-201ENST00000362686 118 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 RNA5SP72-201ENST00000364442 117 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 RNU6-318P-201ENST00000384283 103 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 Y_RNA.506-201ENST00000384494 102 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 RNA5SP252-201ENST00000391131 119 ntBASIC3.7□□□□□ -1.82
RNF38Q9H0F5 NDUFS5P4-201ENST00000412983 318 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms