Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC010409.1-201ENST00000487382 476 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 RNU6-426P-201ENST00000516464 97 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 CYCSP30-201ENST00000546447 172 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 HSPE1P5-201ENST00000561489 272 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 AC020895.1-201ENST00000595362 272 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 AC020914.4-201ENST00000597690 277 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 AC019159.1-201ENST00000605094 187 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 SNORA43.4-201ENST00000629559 138 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 RNA5SP205-201ENST00000364653 136 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 RNU4-17P-201ENST00000365598 141 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 Z98749.2-208ENST00000381646 500 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 Y_RNA.412-201ENST00000384001 104 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 Y_RNA.498-201ENST00000384460 102 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 MIR544A-201ENST00000384855 91 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 MIR487A-201ENST00000385009 80 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 MIR518D-201ENST00000385014 87 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 RNU6-257P-201ENST00000410238 98 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 RN7SKP177-201ENST00000410567 355 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 CYCSP19-201ENST00000411715 316 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 AC138623.1-201ENST00000418060 216 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 RNU6-625P-201ENST00000459412 107 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 RN7SL323P-201ENST00000494712 295 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 RNU1-103P-201ENST00000516502 125 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 AC023632.4-201ENST00000517783 191 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 SUMO2P18-201ENST00000518873 252 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 MIR3145-201ENST00000580727 82 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 AL359881.1-201ENST00000602916 267 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 AL357075.2-201ENST00000614906 189 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 AL773545.4-201ENST00000637262 310 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 AL513478.4-201ENST00000641636 310 ntBASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.26□□□□□ -1.89
SSBP3Q9BWW4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 RNU6-1272P-201ENST00000362776 107 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 RNU6-873P-201ENST00000363833 107 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 Y_RNA.273-201ENST00000364703 102 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 Y_RNA.353-201ENST00000365440 108 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 RNU6-1310P-201ENST00000384153 107 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 SNORA40-201ENST00000388090 126 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 AL357075.1-201ENST00000404107 726 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 RN7SKP27-201ENST00000410684 333 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 SNORA57.3-201ENST00000411095 141 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 AC074117.2-201ENST00000417130 397 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 AC112220.1-201ENST00000434628 355 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 RPS15AP5-201ENST00000436276 388 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 HMGB1P37-201ENST00000439613 609 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 RPS20P10-201ENST00000451209 253 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 HMGB1P22-201ENST00000505315 124 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 MIR2114-201ENST00000516645 80 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 RNU1-45P-201ENST00000517191 141 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 YPEL5P3-201ENST00000547227 352 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 CR383656.8-201ENST00000549046 145 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 AC018448.1-201ENST00000552843 316 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 MIR548X2-201ENST00000579776 100 ntBASIC3.25□□□□□ -1.89
SSBP3Q9BWW4 AC004467.1-201ENST00000615678 330 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms