Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK3BQ9BT76 Z82205.1-201ENST00000428456 297 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AC000111.3-201ENST00000433478 193 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 SNRPGP13-201ENST00000442212 177 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AL049829.1-201ENST00000465411 156 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AC104806.1-201ENST00000508720 308 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AC074344.1-201ENST00000512823 224 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 RNU6-377P-201ENST00000515965 102 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 RNA5SP61-201ENST00000516453 100 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 RNU6-685P-201ENST00000517088 95 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK3BQ9BT76 MIR5094-201ENST00000578766 85 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AC023043.2-201ENST00000589678 1026 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AL034555.1-201ENST00000604816 211 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AC138749.5-201ENST00000611461 208 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AC027807.2-201ENST00000616099 408 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AC116165.2-201ENST00000616705 206 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AC022306.3-201ENST00000619930 550 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AL359740.1-201ENST00000624340 592 ntBASIC0.96□□□□□ -2.26
UPK3BQ9BT76 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
UPK3BQ9BT76 AL391987.6-201ENST00000305671 199 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 RNU5F-7P-201ENST00000363696 115 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 SNORD26-201ENST00000384147 75 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 RNU6-925P-201ENST00000384629 104 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 RPL23AP32-201ENST00000395315 459 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 RPL21P111-201ENST00000418453 477 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 MTND2P4-201ENST00000445034 1004 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC245517.4-201ENST00000448601 281 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 ART2BP-201ENST00000453501 499 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 RPL36AP21-201ENST00000490372 323 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC116562.3-201ENST00000506136 177 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC097473.1-201ENST00000508142 408 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC104136.1-201ENST00000512969 394 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 Y_RNA.672-201ENST00000516289 104 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 RNU6-902P-201ENST00000517212 91 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC068587.5-201ENST00000528506 175 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AP003034.1-201ENST00000534621 422 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 ELOCP32-201ENST00000548625 324 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.95□□□□□ -2.26
UPK3BQ9BT76 MIR3136-201ENST00000583498 78 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC073539.2-201ENST00000597113 165 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 Z69720.2-201ENST00000624755 279 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 SNORD98-201ENST00000636377 67 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AP000560.1-201ENST00000624150 1937 ntBASIC0.95□□□□□ -2.26
UPK3BQ9BT76 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.94□□□□□ -2.26
UPK3BQ9BT76 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
UPK3BQ9BT76 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
UPK3BQ9BT76 MIR26B-201ENST00000362251 77 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 Y_RNA.22-201ENST00000362492 102 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 RNU6-105P-201ENST00000363909 104 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 RNU4-56P-201ENST00000364700 142 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 RNU6-438P-201ENST00000365561 103 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 SNORA20.2-201ENST00000383922 131 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 RNU6-116P-201ENST00000384042 109 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 Y_RNA.576-201ENST00000384781 102 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 RNU2-3P-201ENST00000410144 191 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 RNU6-321P-201ENST00000410912 106 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 CYCSP33-201ENST00000414485 327 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 MTCO3P41-201ENST00000414801 328 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 EBAG9P1-201ENST00000418955 543 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK3BQ9BT76 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.94□□□□□ -2.26
UPK3BQ9BT76 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
UPK3BQ9BT76 FTH1P12-201ENST00000432137 551 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 UBE2V1P8-201ENST00000437166 265 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 AC243964.1-201ENST00000441814 261 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK3BQ9BT76 USP9YP12-201ENST00000450481 570 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.94□□□□□ -2.26
UPK3BQ9BT76 SNRPGP7-201ENST00000469016 106 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 AC099513.1-201ENST00000490423 301 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 RNA5SP445-201ENST00000515889 115 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 AP003461.1-201ENST00000528866 78 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 AC022878.1-201ENST00000530684 149 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 HMGB1P33-201ENST00000563485 527 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 SNORA77B-201ENST00000578179 125 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.94□□□□□ -2.26
UPK3BQ9BT76 HMGN1P30-201ENST00000589286 268 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 AC104073.3-201ENST00000610942 955 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.94□□□□□ -2.26
UPK3BQ9BT76 AC007671.2-201ENST00000637344 619 ntBASIC0.94□□□□□ -2.26
UPK3BQ9BT76 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms