Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USB1Q9BQ65 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
USB1Q9BQ65 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.46□□□□□ -1.7
USB1Q9BQ65 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.46□□□□□ -1.7
USB1Q9BQ65 SNORA73.1-201ENST00000363107 205 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USB1Q9BQ65 AL139095.1-201ENST00000404326 391 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 AC009237.10-201ENST00000414112 510 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.46□□□□□ -1.7
USB1Q9BQ65 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.46□□□□□ -1.7
USB1Q9BQ65 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.46□□□□□ -1.7
USB1Q9BQ65 RNA5SP310-201ENST00000459084 116 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 RPL21P10-201ENST00000463521 490 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 AC140172.1-201ENST00000502928 141 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 RNU6-412P-201ENST00000516434 106 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 IGKV1-32-201ENST00000519290 311 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.46□□□□□ -1.7
USB1Q9BQ65 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.46□□□□□ -1.7
USB1Q9BQ65 AC093732.2-201ENST00000607950 274 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 AL110115.1-201ENST00000614396 364 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USB1Q9BQ65 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USB1Q9BQ65 MAPK10-303ENST00000641324 3959 ntBASIC4.46□□□□□ -1.7
USB1Q9BQ65 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.45□□□□□ -1.7
USB1Q9BQ65 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.45□□□□□ -1.7
USB1Q9BQ65 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USB1Q9BQ65 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.45□□□□□ -1.7
USB1Q9BQ65 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.45□□□□□ -1.7
USB1Q9BQ65 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USB1Q9BQ65 RNU6-1279P-201ENST00000383917 103 ntBASIC4.45□□□□□ -1.7
USB1Q9BQ65 RNA5SP146-201ENST00000410743 123 ntBASIC4.45□□□□□ -1.7
USB1Q9BQ65 CRYBB2P1-203ENST00000415709 538 ntBASIC4.45□□□□□ -1.7
USB1Q9BQ65 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.45□□□□□ -1.7
USB1Q9BQ65 BX284632.1-201ENST00000478218 541 ntBASIC4.45□□□□□ -1.7
USB1Q9BQ65 AC093270.2-201ENST00000486157 792 ntBASIC4.45□□□□□ -1.7
USB1Q9BQ65 RN7SL808P-201ENST00000496066 299 ntBASIC4.45□□□□□ -1.7
USB1Q9BQ65 AC023141.12-201ENST00000512399 199 ntBASIC4.45□□□□□ -1.7
USB1Q9BQ65 MIR3934-201ENST00000579806 107 ntBASIC4.45□□□□□ -1.7
USB1Q9BQ65 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.45□□□□□ -1.7
USB1Q9BQ65 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.45□□□□□ -1.7
USB1Q9BQ65 SDAD1P1-202ENST00000524156 2051 ntBASIC4.45□□□□□ -1.7
USB1Q9BQ65 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
USB1Q9BQ65 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USB1Q9BQ65 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
USB1Q9BQ65 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
USB1Q9BQ65 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USB1Q9BQ65 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
USB1Q9BQ65 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USB1Q9BQ65 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
USB1Q9BQ65 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
USB1Q9BQ65 SNORA31-201ENST00000362607 130 ntBASIC4.44□□□□□ -1.7
USB1Q9BQ65 SNORA72-201ENST00000384339 132 ntBASIC4.44□□□□□ -1.7
USB1Q9BQ65 AC245291.1-201ENST00000419501 328 ntBASIC4.44□□□□□ -1.7
USB1Q9BQ65 AC104333.2-201ENST00000422630 192 ntBASIC4.44□□□□□ -1.7
USB1Q9BQ65 YME1L1P1-201ENST00000429435 297 ntBASIC4.44□□□□□ -1.7
USB1Q9BQ65 RN7SL319P-201ENST00000480656 221 ntBASIC4.44□□□□□ -1.7
USB1Q9BQ65 AC008033.2-201ENST00000542626 177 ntBASIC4.44□□□□□ -1.7
USB1Q9BQ65 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.44□□□□□ -1.7
USB1Q9BQ65 RNU1-30P-201ENST00000606575 163 ntBASIC4.44□□□□□ -1.7
USB1Q9BQ65 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
USB1Q9BQ65 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
USB1Q9BQ65 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
USB1Q9BQ65 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
USB1Q9BQ65 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.44□□□□□ -1.7
USB1Q9BQ65 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
USB1Q9BQ65 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USB1Q9BQ65 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.43□□□□□ -1.7
USB1Q9BQ65 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USB1Q9BQ65 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
USB1Q9BQ65 AC027290.2-201ENST00000623210 18662 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USB1Q9BQ65 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USB1Q9BQ65 Y_RNA.91-201ENST00000363042 107 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 Y_RNA.634-201ENST00000364811 113 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 U8.6-201ENST00000364939 135 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 SNORA2.3-201ENST00000383920 135 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 RNU6-905P-201ENST00000384434 107 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 RNU1-57P-201ENST00000384491 166 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 RPL23AP48-201ENST00000406913 488 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 RNU6-554P-201ENST00000410466 106 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 RNU2-49P-201ENST00000410666 184 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 COX6B1P1-201ENST00000415962 213 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.43□□□□□ -1.7
USB1Q9BQ65 RNU7-57P-201ENST00000459540 60 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 AP000873.1-201ENST00000463987 400 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 AC083906.5-201ENST00000503722 328 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 AC010598.1-201ENST00000510378 103 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.43□□□□□ -1.7
USB1Q9BQ65 AL022345.2-201ENST00000606307 135 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 uc_338.18-201ENST00000615451 175 ntBASIC4.43□□□□□ -1.7
USB1Q9BQ65 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
USB1Q9BQ65 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USB1Q9BQ65 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USB1Q9BQ65 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.43□□□□□ -1.7
USB1Q9BQ65 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.42□□□□□ -1.7
USB1Q9BQ65 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
USB1Q9BQ65 RNA5SP123-201ENST00000363244 119 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 RNA5SP428-201ENST00000365129 132 ntBASIC4.42□□□□□ -1.7
USB1Q9BQ65 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms