Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RPS15AP5-201ENST00000436276 388 ntBASIC3.18□□□□□ -1.9
SMOQ99835 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.18□□□□□ -1.9
SMOQ99835 AP001025.1-201ENST00000486139 332 ntBASIC3.18□□□□□ -1.9
SMOQ99835 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.18□□□□□ -1.9
SMOQ99835 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.18□□□□□ -1.9
SMOQ99835 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.18□□□□□ -1.9
SMOQ99835 AL590705.4-201ENST00000532209 134 ntBASIC3.18□□□□□ -1.9
SMOQ99835 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.18□□□□□ -1.9
SMOQ99835 AC019159.1-201ENST00000605094 187 ntBASIC3.18□□□□□ -1.9
SMOQ99835 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.18□□□□□ -1.9
SMOQ99835 AC024581.2-201ENST00000619986 252 ntBASIC3.18□□□□□ -1.9
SMOQ99835 SCARNA15.3-201ENST00000626315 122 ntBASIC3.18□□□□□ -1.9
SMOQ99835 SCARNA4.1-201ENST00000628597 123 ntBASIC3.18□□□□□ -1.9
SMOQ99835 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.18□□□□□ -1.9
SMOQ99835 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.18□□□□□ -1.9
SMOQ99835 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SMOQ99835 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMOQ99835 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
SMOQ99835 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.18□□□□□ -1.9
SMOQ99835 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMOQ99835 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMOQ99835 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.17□□□□□ -1.9
SMOQ99835 SNORD32A-201ENST00000364805 84 ntBASIC3.17□□□□□ -1.9
SMOQ99835 RNU6-574P-201ENST00000384265 107 ntBASIC3.17□□□□□ -1.9
SMOQ99835 RNU6-823P-201ENST00000391042 103 ntBASIC3.17□□□□□ -1.9
SMOQ99835 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.17□□□□□ -1.9
SMOQ99835 AL161651.1-201ENST00000440882 223 ntBASIC3.17□□□□□ -1.9
SMOQ99835 OR2AQ1P-201ENST00000451972 200 ntBASIC3.17□□□□□ -1.9
SMOQ99835 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.17□□□□□ -1.9
SMOQ99835 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.17□□□□□ -1.9
SMOQ99835 U8.20-201ENST00000459445 131 ntBASIC3.17□□□□□ -1.9
SMOQ99835 RNU7-23P-201ENST00000459465 62 ntBASIC3.17□□□□□ -1.9
SMOQ99835 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.17□□□□□ -1.9
SMOQ99835 RPL30P10-201ENST00000488148 337 ntBASIC3.17□□□□□ -1.9
SMOQ99835 RNU7-4P-201ENST00000516961 62 ntBASIC3.17□□□□□ -1.9
SMOQ99835 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.17□□□□□ -1.9
SMOQ99835 AC022080.3-201ENST00000544433 482 ntBASIC3.17□□□□□ -1.9
SMOQ99835 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.17□□□□□ -1.9
SMOQ99835 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.17□□□□□ -1.9
SMOQ99835 AC006111.3-201ENST00000622137 383 ntBASIC3.17□□□□□ -1.9
SMOQ99835 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.17□□□□□ -1.9
SMOQ99835 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMOQ99835 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SMOQ99835 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.17□□□□□ -1.9
SMOQ99835 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMOQ99835 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SMOQ99835 RNU6-843P-201ENST00000384454 104 ntBASIC3.16□□□□□ -1.9
SMOQ99835 MIR544A-201ENST00000384855 91 ntBASIC3.16□□□□□ -1.9
SMOQ99835 SNORA12.2-201ENST00000391040 156 ntBASIC3.16□□□□□ -1.9
SMOQ99835 RNU2-49P-201ENST00000410666 184 ntBASIC3.16□□□□□ -1.9
SMOQ99835 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.16□□□□□ -1.9
SMOQ99835 AC007098.1-201ENST00000420122 367 ntBASIC3.16□□□□□ -1.9
SMOQ99835 TRIAP1P1-201ENST00000427062 225 ntBASIC3.16□□□□□ -1.9
SMOQ99835 Z82188.1-201ENST00000436709 154 ntBASIC3.16□□□□□ -1.9
SMOQ99835 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.16□□□□□ -1.9
SMOQ99835 RPL22P13-201ENST00000493291 347 ntBASIC3.16□□□□□ -1.9
SMOQ99835 AC097462.2-201ENST00000504623 481 ntBASIC3.16□□□□□ -1.9
SMOQ99835 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.16□□□□□ -1.9
SMOQ99835 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.16□□□□□ -1.9
SMOQ99835 RN7SKP272-201ENST00000516988 232 ntBASIC3.16□□□□□ -1.9
SMOQ99835 AC006600.1-201ENST00000572529 153 ntBASIC3.16□□□□□ -1.9
SMOQ99835 AL132822.1-201ENST00000617063 513 ntBASIC3.16□□□□□ -1.9
SMOQ99835 AC010680.1-201ENST00000590024 3590 ntBASIC3.16□□□□□ -1.9
SMOQ99835 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SMOQ99835 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMOQ99835 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMOQ99835 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMOQ99835 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMOQ99835 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMOQ99835 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMOQ99835 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.15□□□□□ -1.9
SMOQ99835 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SMOQ99835 Y_RNA.106-201ENST00000363189 100 ntBASIC3.15□□□□□ -1.91
SMOQ99835 Y_RNA.405-201ENST00000383979 100 ntBASIC3.15□□□□□ -1.91
SMOQ99835 Y_RNA.451-201ENST00000384200 100 ntBASIC3.15□□□□□ -1.91
SMOQ99835 Y_RNA.524-201ENST00000384564 100 ntBASIC3.15□□□□□ -1.91
SMOQ99835 Y_RNA.561-201ENST00000384694 100 ntBASIC3.15□□□□□ -1.91
SMOQ99835 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SMOQ99835 UBA52P6-201ENST00000399822 382 ntBASIC3.15□□□□□ -1.91
SMOQ99835 RNU6-1077P-201ENST00000410506 102 ntBASIC3.15□□□□□ -1.91
SMOQ99835 RNU6-1245P-201ENST00000411130 106 ntBASIC3.15□□□□□ -1.91
SMOQ99835 AL358453.1-201ENST00000422522 250 ntBASIC3.15□□□□□ -1.91
SMOQ99835 RPL23AP22-201ENST00000437556 453 ntBASIC3.15□□□□□ -1.91
SMOQ99835 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.15□□□□□ -1.91
SMOQ99835 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.15□□□□□ -1.91
SMOQ99835 AL513124.1-201ENST00000450410 614 ntBASIC3.15□□□□□ -1.91
SMOQ99835 RPS29P26-201ENST00000477483 171 ntBASIC3.15□□□□□ -1.91
SMOQ99835 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMOQ99835 AC008269.2-201ENST00000561915 1105 ntBASIC3.15□□□□□ -1.91
SMOQ99835 AC010928.2-201ENST00000588017 287 ntBASIC3.15□□□□□ -1.91
SMOQ99835 SNORA43.4-201ENST00000629559 138 ntBASIC3.15□□□□□ -1.91
SMOQ99835 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.15□□□□□ -1.91
SMOQ99835 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMOQ99835 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMOQ99835 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.15□□□□□ -1.91
SMOQ99835 AC233981.2-201ENST00000611524 1614 ntBASIC3.15□□□□□ -1.91
SMOQ99835 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMOQ99835 RBBP8P1-201ENST00000449447 1844 ntBASIC3.14□□□□□ -1.91
SMOQ99835 AL035425.3-201ENST00000564206 4996 ntBASIC3.14□□□□□ -1.91
SMOQ99835 Y_RNA.424-201ENST00000384063 103 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms