Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC114755.3-201ENST00000481111 251 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 HMGN1P13-201ENST00000505795 138 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 RNA5SP503-201ENST00000517047 117 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 RN7SKP258-201ENST00000517151 304 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 AC067904.2-201ENST00000517322 1283 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 AC023632.1-201ENST00000518463 375 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 AC092470.1-201ENST00000546187 132 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 AC055764.2-201ENST00000610089 670 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 AL031667.3-201ENST00000620124 655 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 SNORD114-12-201ENST00000365400 75 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 RNU2-3P-201ENST00000410144 191 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 RNA5SP100-201ENST00000410903 110 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 RNA5SP59-201ENST00000410922 110 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL12A1Q99715 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL12A1Q99715 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL12A1Q99715 AC018868.1-201ENST00000491307 315 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 RN7SKP164-201ENST00000516138 266 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL12A1Q99715 MIR3167-201ENST00000579623 85 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 AC104408.1-201ENST00000605241 170 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 MIR3666-201ENST00000607845 111 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 AL365434.2-201ENST00000607979 234 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 HLA-S-202ENST00000425174 53 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL12A1Q99715 SNORA31.17-201ENST00000516953 127 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 CYCSP27-201ENST00000527643 293 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 MIR5692A1-201ENST00000580523 69 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 AL391001.1-201ENST00000602747 715 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 AL353778.1-201ENST00000603149 408 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 AL390237.1-201ENST00000404226 1415 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.27□□□□□ -2.45
COL12A1Q99715 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 MTCYBP29-201ENST00000436327 1006 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 MTCO3P43-201ENST00000440974 771 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 ZNF886P-201ENST00000450781 723 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL12A1Q99715 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL12A1Q99715 AC002400.1-201ENST00000569310 726 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 MIR4432-201ENST00000581823 84 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 AC022432.1-201ENST00000595739 310 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 AC112187.2-201ENST00000604345 283 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 Z82243.1-201ENST00000609432 473 ntBASIC-0.27□□□□□ -2.45
COL12A1Q99715 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 MIR412-201ENST00000362142 91 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 RNU6-756P-201ENST00000383997 107 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 AP001324.2-201ENST00000461163 319 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 RNU6-863P-201ENST00000515989 104 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 AC023157.2-201ENST00000540596 141 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 AC027288.2-201ENST00000553028 243 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 AL121579.1-201ENST00000555129 305 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 AL353765.1-201ENST00000605514 183 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 MIR8063-201ENST00000621930 81 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 MTCO3P17-201ENST00000443775 513 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 AC104164.3-201ENST00000467363 1258 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 RPF2P2-201ENST00000504693 896 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 RNU6-798P-201ENST00000516912 103 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 AL512310.8-201ENST00000550183 120 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 AC025423.5-201ENST00000550230 219 ntBASIC-0.28□□□□□ -2.45
COL12A1Q99715 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.28□□□□□ -2.45
COL12A1Q99715 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 MIR597-201ENST00000384968 97 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 DSTNP4-201ENST00000399472 474 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 RNU6-284P-201ENST00000411105 106 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 AC007435.1-201ENST00000421086 415 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL12A1Q99715 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL12A1Q99715 AL606662.1-201ENST00000445763 553 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL12A1Q99715 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.29□□□□□ -2.46
COL12A1Q99715 MIR5697-201ENST00000578045 78 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 AL009028.1-201ENST00000604895 802 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 AC055876.5-201ENST00000605667 259 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 SNORD114-11-201ENST00000363738 75 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 MIR610-201ENST00000385139 96 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL12A1Q99715 FABP5P4-201ENST00000437203 171 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 AC069113.3-201ENST00000521019 150 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms