Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL590705.4-201ENST00000532209 134 ntBASIC2.99□□□□□ -1.93
SNX18Q96RF0 AC009163.5-201ENST00000575421 637 ntBASIC2.99□□□□□ -1.93
SNX18Q96RF0 MIR3671-201ENST00000580455 88 ntBASIC2.99□□□□□ -1.93
SNX18Q96RF0 MIR3200-201ENST00000580767 85 ntBASIC2.99□□□□□ -1.93
SNX18Q96RF0 MIR5195-201ENST00000583555 115 ntBASIC2.99□□□□□ -1.93
SNX18Q96RF0 AL138825.1-201ENST00000618587 192 ntBASIC2.99□□□□□ -1.93
SNX18Q96RF0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SNX18Q96RF0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
SNX18Q96RF0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SNX18Q96RF0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SNX18Q96RF0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SNX18Q96RF0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX18Q96RF0 RNU6-874P-201ENST00000362390 105 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 RNU4-35P-201ENST00000362588 141 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 Y_RNA.176-201ENST00000363815 109 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 RNU1-140P-201ENST00000365040 165 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 SNORD17-201ENST00000390930 237 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX18Q96RF0 RPL32P35-201ENST00000415214 394 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 AL031659.1-201ENST00000447075 539 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 MED28P2-201ENST00000475771 317 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC010655.3-201ENST00000478818 450 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 RPL30P10-201ENST00000488148 337 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 MRPS35P2-201ENST00000508242 191 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX18Q96RF0 SNORA40.14-201ENST00000516543 86 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 ACA59.2-201ENST00000517061 156 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 SCARNA20.6-201ENST00000517251 106 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC009812.2-201ENST00000517657 457 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC022616.4-201ENST00000522985 181 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC040926.1-201ENST00000530195 238 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 MRPS36P4-201ENST00000534436 298 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX18Q96RF0 MIR3149-201ENST00000584629 83 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC060766.3-201ENST00000591442 263 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 VN1R91P-201ENST00000594377 169 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC024581.2-201ENST00000619986 252 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 AC233263.6-201ENST00000631132 1963 ntBASIC2.98□□□□□ -1.93
SNX18Q96RF0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SNX18Q96RF0 AC004944.1-201ENST00000517807 3059 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX18Q96RF0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX18Q96RF0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX18Q96RF0 RNA5SP267-201ENST00000364893 126 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX18Q96RF0 Y_RNA.405-201ENST00000383979 100 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 Y_RNA.451-201ENST00000384200 100 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 Y_RNA.524-201ENST00000384564 100 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 Y_RNA.561-201ENST00000384694 100 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 Y_RNA.574-201ENST00000384766 95 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 SNORA69.1-201ENST00000390904 137 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SNX18Q96RF0 RNU2-49P-201ENST00000410666 184 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 CST9LP2-201ENST00000437612 320 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 UQCRHP3-201ENST00000451503 251 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 RN7SKP210-201ENST00000459176 261 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 SNRPGP7-201ENST00000469016 106 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 AC091874.1-201ENST00000511402 339 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 IGKV2-26-201ENST00000518305 343 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 AC131281.1-201ENST00000522984 164 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 AP002404.1-201ENST00000532005 451 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 AC016727.2-201ENST00000603988 621 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 Z98751.3-201ENST00000604447 521 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 AC019159.1-201ENST00000605094 187 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.97□□□□□ -1.93
SNX18Q96RF0 uc_338.1-201ENST00000612113 180 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 U2.1-201ENST00000618978 145 ntBASIC2.97□□□□□ -1.93
SNX18Q96RF0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
SNX18Q96RF0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SNX18Q96RF0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SNX18Q96RF0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SNX18Q96RF0 RNA5SP197-201ENST00000363357 119 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 Y_RNA.210-201ENST00000364161 110 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 RNU6-505P-201ENST00000384427 107 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 SNORA46-201ENST00000384762 135 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 MIR628-201ENST00000385229 95 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 SNORA12.2-201ENST00000391040 156 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 MIR1302-3-201ENST00000408128 138 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 RNA5SP229-201ENST00000410809 99 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX18Q96RF0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX18Q96RF0 Z82188.1-201ENST00000436709 154 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX18Q96RF0 MTCO3P8-201ENST00000453691 755 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 AC008155.2-201ENST00000464337 397 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX18Q96RF0 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 RNU5F-8P-201ENST00000515941 111 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 Y_RNA.715-201ENST00000517082 110 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 SNORA31.21-201ENST00000517180 77 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.96□□□□□ -1.94
SNX18Q96RF0 AL355297.3-201ENST00000604082 446 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 PRR13P7-201ENST00000605538 430 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX18Q96RF0 MIR3529-201ENST00000637713 78 ntBASIC2.96□□□□□ -1.94
SNX18Q96RF0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNX18Q96RF0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms