| TMEM41A | Q96HV5 | MIR4325-201 | ENST00000583049 | 90 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AL355297.2-201 | ENST00000604792 | 129 nt | BASIC | 2.86 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | MCF2-204 | ENST00000414978 | 3813 nt | APPRIS ALT2 TSL 5 BASIC | 2.86 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | HELLS-201 | ENST00000239026 | 2740 nt | TSL 5 BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | RNU6-1059P-201 | ENST00000363752 | 98 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | RNA5SP125-201 | ENST00000364843 | 120 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | RNU5E-4P-201 | ENST00000364931 | 120 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | RNU6-596P-201 | ENST00000365395 | 98 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | RNU6-1286P-201 | ENST00000383871 | 107 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | SNORD15B-201 | ENST00000384714 | 146 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | RNA5SP492-201 | ENST00000411330 | 114 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | HMGB3P2-201 | ENST00000411913 | 584 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AC003685.2-201 | ENST00000422795 | 395 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AL353705.4-201 | ENST00000449661 | 238 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | RN7SL499P-201 | ENST00000481141 | 276 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AC104304.1-201 | ENST00000505797 | 291 nt | APPRIS P1 TSL 3 BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AC026782.1-201 | ENST00000512952 | 449 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | RNU4ATAC7P-201 | ENST00000516280 | 125 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | SCARNA20.6-201 | ENST00000517251 | 106 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AC103726.1-201 | ENST00000520785 | 474 nt | TSL 2 BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AP001189.6-201 | ENST00000528781 | 831 nt | TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AC100778.1-201 | ENST00000583579 | 332 nt | TSL 3 BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | UBL5P2-201 | ENST00000583788 | 219 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AC092070.3-201 | ENST00000596041 | 337 nt | TSL 3 BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | ZNF667-AS1-209 | ENST00000601875 | 495 nt | TSL 3 BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | CDKN2B-AS.1-201 | ENST00000617921 | 150 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | MIR1302-1-201 | ENST00000637932 | 143 nt | BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | EMCN-202 | ENST00000305864 | 1575 nt | TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | TAS2R13-201 | ENST00000390677 | 1637 nt | APPRIS P1 BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | CYSLTR1-203 | ENST00000614798 | 2681 nt | APPRIS P1 TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | ABCG2-204 | ENST00000515655 | 4276 nt | TSL 1 (best) BASIC | 2.85 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | KCNIP4-IT1-201 | ENST00000627566 | 9848 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AC069528.2-201 | ENST00000624849 | 1991 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | THOC2-201 | ENST00000245838 | 5609 nt | APPRIS P1 TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | Y_RNA.2-201 | ENST00000362330 | 96 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | SNORA36A-201 | ENST00000384221 | 132 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | TRDJ3-201 | ENST00000390476 | 59 nt | APPRIS P1 BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | Y_RNA.594-201 | ENST00000410373 | 140 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | Y_RNA.604-201 | ENST00000410574 | 102 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AC236972.1-201 | ENST00000433225 | 199 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AL591501.1-201 | ENST00000439992 | 495 nt | TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AL513124.1-201 | ENST00000450410 | 614 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | RNU7-26P-201 | ENST00000458980 | 63 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | FO393415.2-201 | ENST00000480085 | 343 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AC091976.1-202 | ENST00000509211 | 630 nt | TSL 3 BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | RNU6-559P-201 | ENST00000516151 | 98 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | Z98751.3-201 | ENST00000604447 | 521 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AL627309.6-201 | ENST00000606857 | 840 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AL132765.2-201 | ENST00000610812 | 351 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | HMGB1P24-202 | ENST00000615653 | 685 nt | BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | AC007218.2-201 | ENST00000636913 | 179 nt | TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | BAZ2B-202 | ENST00000343439 | 2364 nt | TSL 5 BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | MCMDC2-201 | ENST00000313616 | 2043 nt | TSL 2 BASIC | 2.84 | □□□□□ -1.95 | | |
| TMEM41A | Q96HV5 | MTND5P9-201 | ENST00000503854 | 1755 nt | BASIC | 2.84 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | DEUP1-201 | ENST00000298050 | 2664 nt | APPRIS P1 TSL 5 BASIC | 2.84 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AF165147.1-201 | ENST00000433310 | 6103 nt | TSL 2 BASIC | 2.84 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | MINDY3-202 | ENST00000378036 | 2452 nt | TSL 2 BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | TFEC-202 | ENST00000320239 | 6605 nt | APPRIS P1 TSL 1 (best) BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | GABRG2-221 | ENST00000639683 | 3600 nt | TSL 5 BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | GABRG2-209 | ENST00000638660 | 3799 nt | TSL 5 BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | SNORD50.1-201 | ENST00000362987 | 71 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | SNORA38-201 | ENST00000363946 | 132 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | SNORA29-201 | ENST00000384183 | 140 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | Y_RNA.474-201 | ENST00000384341 | 102 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | MT-TD-201 | ENST00000387419 | 68 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | RNU6-174P-201 | ENST00000410406 | 106 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | RNA5SP494-201 | ENST00000410653 | 129 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | RNU6-370P-201 | ENST00000411008 | 104 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC012306.1-201 | ENST00000423267 | 114 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC073325.1-201 | ENST00000443714 | 542 nt | TSL 4 BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC117465.1-201 | ENST00000457125 | 522 nt | TSL 3 BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC090096.1-201 | ENST00000489168 | 390 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC021146.2-201 | ENST00000504736 | 556 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC099499.1-201 | ENST00000505040 | 558 nt | TSL 3 BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AP002992.1-202 | ENST00000530842 | 551 nt | TSL 2 BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | MRPS36P4-201 | ENST00000534436 | 298 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | RPS3AP23-202 | ENST00000574601 | 686 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC011494.1-201 | ENST00000596454 | 237 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | 7SK.7-201 | ENST00000603504 | 247 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC009229.3-201 | ENST00000608056 | 282 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC009318.2-201 | ENST00000610917 | 651 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC069234.5-201 | ENST00000611056 | 416 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC091953.5-201 | ENST00000622919 | 233 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC135776.4-201 | ENST00000624300 | 1904 nt | BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | GLMN-201 | ENST00000370360 | 1995 nt | APPRIS P1 TSL 1 (best) BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | HDX-201 | ENST00000297977 | 6200 nt | APPRIS P1 TSL 1 (best) BASIC | 2.83 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AL353743.1-202 | ENST00000431724 | 1695 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | MIR422A-201 | ENST00000362286 | 90 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | Y_RNA.387-201 | ENST00000383918 | 102 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | RNU6-842P-201 | ENST00000384269 | 107 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | Y_RNA.473-201 | ENST00000384333 | 102 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | Y_RNA.529-201 | ENST00000384586 | 119 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | HIST1H2APS3-201 | ENST00000403259 | 134 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | RNU4-14P-201 | ENST00000410858 | 122 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AL590999.1-206 | ENST00000437947 | 436 nt | TSL 3 BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC133865.1-201 | ENST00000438619 | 339 nt | TSL 3 BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | RPS29P2-201 | ENST00000479278 | 136 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC145146.1-201 | ENST00000496370 | 254 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | Y_RNA.670-201 | ENST00000516255 | 105 nt | BASIC | 2.82 | □□□□□ -1.96 | | |
| TMEM41A | Q96HV5 | AC022690.2-201 | ENST00000525673 | 589 nt | TSL 3 BASIC | 2.82 | □□□□□ -1.96 | | |