Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RPS29P31-201ENST00000446147 164 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 MRPL42P6-201ENST00000486397 371 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.45□□□□□ -1.86
CHFRQ96EP1 SNORD116-28-201ENST00000516123 91 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 RNU6-496P-201ENST00000516145 99 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.45□□□□□ -1.86
CHFRQ96EP1 CR383656.7-201ENST00000548164 174 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 AL442163.3-201ENST00000554110 156 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 OR4H12P-201ENST00000556269 907 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 AC098826.3-201ENST00000603823 466 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 AC123912.5-201ENST00000605470 343 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 AC104465.1-201ENST00000611365 139 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.45□□□□□ -1.86
CHFRQ96EP1 U6.106-201ENST00000636360 105 ntBASIC3.45□□□□□ -1.86
CHFRQ96EP1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHFRQ96EP1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CHFRQ96EP1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHFRQ96EP1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CHFRQ96EP1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHFRQ96EP1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CHFRQ96EP1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHFRQ96EP1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHFRQ96EP1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHFRQ96EP1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.44□□□□□ -1.86
CHFRQ96EP1 PWAR6-201ENST00000552334 4618 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 RNU6-1020P-201ENST00000363684 107 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 UBA52P6-201ENST00000399822 382 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 RNU6-651P-201ENST00000411040 105 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 SSXP9-201ENST00000417503 292 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.44□□□□□ -1.86
CHFRQ96EP1 BX679664.1-201ENST00000434429 253 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 RPL37P6-201ENST00000460682 294 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 RPL23AP14-201ENST00000468281 468 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 COX6CP14-201ENST00000469580 174 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 AC006445.1-201ENST00000491925 405 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 SEPT14P8-201ENST00000508026 178 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.44□□□□□ -1.86
CHFRQ96EP1 Y_RNA.662-201ENST00000516028 97 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 RNU6-479P-201ENST00000516348 105 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 SNORA31.18-201ENST00000517043 134 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 AC103783.1-201ENST00000520506 373 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 MRPS18CP4-201ENST00000535821 231 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.44□□□□□ -1.86
CHFRQ96EP1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CHFRQ96EP1 AL033523.1-201ENST00000605153 153 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.44□□□□□ -1.86
CHFRQ96EP1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
CHFRQ96EP1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CHFRQ96EP1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CHFRQ96EP1 DDX10P1-201ENST00000448545 1933 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHFRQ96EP1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHFRQ96EP1 AC068647.1-201ENST00000489539 2265 ntBASIC3.44□□□□□ -1.86
CHFRQ96EP1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHFRQ96EP1 BX322639.1-202ENST00000423987 2213 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.43□□□□□ -1.86
CHFRQ96EP1 SNORD113-8-201ENST00000363497 74 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 Y_RNA.240-201ENST00000364469 95 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 SNORA22C-201ENST00000384614 134 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 RNU6-959P-201ENST00000384671 107 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 RPL21P75-201ENST00000396599 483 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 RPS4XP3-201ENST00000398541 413 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 RPL21P28-201ENST00000401418 483 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 AL079342.1-201ENST00000401460 267 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 RNU6-1135P-201ENST00000411083 103 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.43□□□□□ -1.86
CHFRQ96EP1 RPS15AP6-201ENST00000420703 385 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 AL590556.1-201ENST00000423231 483 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 HSPE1P25-201ENST00000455484 251 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 AC091179.1-201ENST00000461606 579 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 RPL21P39-201ENST00000463605 483 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 AC132942.1-201ENST00000486753 483 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 RPL30P10-201ENST00000488148 337 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 AC093591.1-201ENST00000491435 481 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 RPL21P16-201ENST00000495531 483 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 SNORA31.3-201ENST00000516029 96 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 RNU6-390P-201ENST00000516259 103 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.43□□□□□ -1.86
CHFRQ96EP1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.43□□□□□ -1.86
CHFRQ96EP1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.43□□□□□ -1.86
CHFRQ96EP1 MIR4425-201ENST00000580572 84 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 AL162274.2-201ENST00000614406 332 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 SCARNA15.3-201ENST00000626315 122 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 SCARNA4.1-201ENST00000628597 123 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.43□□□□□ -1.86
CHFRQ96EP1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHFRQ96EP1 SDAD1P2-201ENST00000441308 2028 ntBASIC3.43□□□□□ -1.86
CHFRQ96EP1 AC007785.2-201ENST00000598627 1916 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 AL021368.2-201ENST00000606125 5352 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHFRQ96EP1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHFRQ96EP1 Y_RNA.292-201ENST00000364904 97 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 Y_RNA.304-201ENST00000365011 112 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 Y_RNA.324-201ENST00000365165 102 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 RNU6-937P-201ENST00000384325 106 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 RNU6-933P-201ENST00000384424 107 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 SNORA1.3-201ENST00000384676 136 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CHFRQ96EP1 RNU6-918P-201ENST00000391219 106 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 MTCYBP2-201ENST00000407745 171 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms