Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 HSBP1P1-201ENST00000555205 166 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AL117187.1-201ENST00000555482 181 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AP000942.4-201ENST00000604811 241 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AL356157.2-201ENST00000605122 111 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AC138305.3-201ENST00000624988 240 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 AC004944.1-201ENST00000517807 3059 ntBASIC3.06□□□□□ -1.92
ATG4AQ8WYN0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 RNU6-1309P-201ENST00000363305 108 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 Y_RNA.144-201ENST00000363521 113 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 MIR181A2-201ENST00000384863 110 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 MIR548F4-201ENST00000408515 105 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 RNA5SP494-201ENST00000410653 129 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 RNA5SP120-201ENST00000410900 112 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 RN7SKP58-201ENST00000411010 305 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 BMS1P22-201ENST00000414726 313 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 EIF1AXP1-201ENST00000419267 435 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 RPL23AP95-201ENST00000426806 265 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 AC006028.1-201ENST00000438379 402 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 AC012308.1-201ENST00000451232 178 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 AP001025.1-201ENST00000486139 332 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 SNORA40.14-201ENST00000516543 86 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 AC144568.1-201ENST00000520139 137 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 CKS1BP7-201ENST00000522230 235 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 AC104581.2-201ENST00000572227 430 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 AC113195.1-201ENST00000579952 141 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 7SK.7-201ENST00000603504 247 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 AC007179.3-201ENST00000604976 235 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 AC087588.2-201ENST00000617667 426 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 AC233263.6-201ENST00000631132 1963 ntBASIC3.05□□□□□ -1.92
ATG4AQ8WYN0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 AC233981.2-201ENST00000611524 1614 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 RNA5SP267-201ENST00000364893 126 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 Y_RNA.389-201ENST00000383924 113 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 RNU6-968P-201ENST00000384076 107 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 RNVU1-14-201ENST00000384770 164 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 SNORA12.2-201ENST00000391040 156 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 RNU6-101P-201ENST00000410323 104 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 Y_RNA.605-201ENST00000410577 105 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 RNU2-49P-201ENST00000410666 184 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 PTGES3P4-201ENST00000426243 356 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 MTCO3P29-201ENST00000432119 779 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 RPL23AP83-201ENST00000434984 473 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 SETP5-201ENST00000437270 562 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 RPS26P21-201ENST00000475397 348 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 AC006445.1-201ENST00000491925 405 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 AC091874.1-201ENST00000511402 339 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 AC008885.1-201ENST00000514930 301 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 SNORA31.21-201ENST00000517180 77 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 AC006600.1-201ENST00000572529 153 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 MIR4474-201ENST00000579189 78 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 MIR5188-201ENST00000583467 113 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 AC091152.3-201ENST00000604227 325 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 AC007256.1-201ENST00000392253 2765 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.04□□□□□ -1.92
ATG4AQ8WYN0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 RBBP8P1-201ENST00000449447 1844 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 RNY3P11-201ENST00000364153 102 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 RNU4-9P-201ENST00000364951 139 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 RNU6-1286P-201ENST00000383871 107 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 Y_RNA.424-201ENST00000384063 103 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 RNU6-622P-201ENST00000384272 103 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 MIR544A-201ENST00000384855 91 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 RNU6-823P-201ENST00000391042 103 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 SAR1AP2-201ENST00000392696 594 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 AL358453.1-201ENST00000422522 250 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 AC096644.2-201ENST00000429278 159 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 HMGN2P20-201ENST00000437531 273 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 AC074250.1-201ENST00000511117 192 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 RN7SKP272-201ENST00000516988 232 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 AC022616.4-201ENST00000522985 181 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 MRPS36P4-201ENST00000534436 298 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms