Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 Y_RNA.105-201ENST00000363182 111 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-1062P-201ENST00000383908 107 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-708P-201ENST00000384217 107 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 Y_RNA.471-201ENST00000384312 102 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 RNVU1-14-201ENST00000384770 164 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 MIR521-1-201ENST00000384902 87 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 SNORA69.1-201ENST00000390904 137 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 AC007098.1-201ENST00000420122 367 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 EIF4EP2-201ENST00000422816 654 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 AL358075.3-201ENST00000426289 226 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 AL159987.2-201ENST00000432754 307 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 TRBVB-201ENST00000477100 408 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 RPS29P2-201ENST00000479278 136 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 AC106707.2-201ENST00000484182 374 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 AC139453.3-201ENST00000493276 369 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 HMGB1P35-201ENST00000503360 598 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-579P-201ENST00000516879 102 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 SNORA31.19-201ENST00000517079 126 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-111P-201ENST00000517179 105 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 AC034114.1-201ENST00000520293 285 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 AC026333.2-201ENST00000542164 106 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 AC012433.1-201ENST00000588916 398 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 AC009314.1-201ENST00000603871 304 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 AL049781.1-201ENST00000623195 3585 ntBASIC3.29□□□□□ -1.88
SIMC1Q8NDZ2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 MIR30E-201ENST00000362104 92 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-611P-201ENST00000384276 104 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 Y_RNA.478-201ENST00000384358 107 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 MIR34A-201ENST00000385130 110 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 MIR628-201ENST00000385229 95 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-700P-201ENST00000391043 107 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 SNORA40C-201ENST00000391285 128 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 Y_RNA.592-201ENST00000410274 109 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-121P-201ENST00000410525 99 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-130P-201ENST00000411112 103 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 SNORD56-201ENST00000413522 71 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 RPL21P38-201ENST00000418090 167 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 MYL8P-204ENST00000431574 518 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 NDUFB1P2-201ENST00000449477 176 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 AC025518.1-201ENST00000479856 347 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 RPS27P26-201ENST00000494583 239 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 SNORD19.2-201ENST00000516978 73 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 LINC00933-203ENST00000559812 219 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 AP000787.2-201ENST00000604432 568 ntBASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SIMC1Q8NDZ2 MTND5P9-201ENST00000503854 1755 ntBASIC3.28□□□□□ -1.89
SIMC1Q8NDZ2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
SIMC1Q8NDZ2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SIMC1Q8NDZ2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 AP000560.1-201ENST00000624150 1937 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 Y_RNA.117-201ENST00000363294 101 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 Y_RNA.183-201ENST00000363882 113 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 RNU6-827P-201ENST00000365553 106 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 AL590135.1-201ENST00000422215 156 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 RPEP5-201ENST00000441137 268 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 RN7SL601P-201ENST00000471221 293 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 AC098869.1-201ENST00000481627 292 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 RPS29P20-201ENST00000489592 171 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 GZMAP1-201ENST00000503054 631 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 RNU6-138P-201ENST00000515952 107 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 RNU6-1183P-201ENST00000517054 60 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 AC006557.5-201ENST00000603126 811 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 MIR8076-201ENST00000611401 83 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 AC022149.2-201ENST00000621061 203 ntBASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SIMC1Q8NDZ2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIMC1Q8NDZ2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.26□□□□□ -1.89
SIMC1Q8NDZ2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SIMC1Q8NDZ2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SIMC1Q8NDZ2 RNU6-212P-201ENST00000362642 104 ntBASIC3.26□□□□□ -1.89
SIMC1Q8NDZ2 RNA5SP383-201ENST00000362934 120 ntBASIC3.26□□□□□ -1.89
SIMC1Q8NDZ2 SNORD50.1-201ENST00000362987 71 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms