Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 S100A11P1-201ENST00000477525 312 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 AC090543.2-201ENST00000483963 348 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 AC004057.1-201ENST00000485827 348 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 AL132838.2-201ENST00000492041 314 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 RNU6-436P-201ENST00000516171 114 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 AC016256.1-201ENST00000547971 354 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 AL391813.1-201ENST00000603098 260 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 RNU6-235P-201ENST00000362644 107 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 RNU6-727P-201ENST00000363592 107 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 Y_RNA.294-201ENST00000364916 102 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 RNU6-1279P-201ENST00000383917 103 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 MIR544A-201ENST00000384855 91 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 RN7SKP53-201ENST00000411337 315 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 HSPE1P12-201ENST00000412576 301 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AL121914.1-201ENST00000450188 156 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AL645939.1-201ENST00000453429 797 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AC245047.8-201ENST00000456455 284 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AC006026.2-201ENST00000457376 180 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AC091179.3-201ENST00000474761 144 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 Y_RNA.712-201ENST00000517011 92 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 RNU6-1183P-201ENST00000517054 60 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AC090049.2-201ENST00000550377 109 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 MIR1254-2-201ENST00000579553 63 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 MIR5582-201ENST00000579697 68 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AP002826.1-201ENST00000608835 315 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AC013791.1-201ENST00000616619 62 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AP001340.1-201ENST00000624405 217 ntBASIC3.67□□□□□ -1.82
ATG4DQ86TL0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
ATG4DQ86TL0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4DQ86TL0 SNORA8.3-201ENST00000384679 139 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 MIR518D-201ENST00000385014 87 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 MIR1251-201ENST00000408552 70 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 RNU6-588P-201ENST00000410281 105 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 AL117339.2-201ENST00000430475 180 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4DQ86TL0 SNRPEP9-201ENST00000436794 238 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 AC007969.2-201ENST00000441891 191 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4DQ86TL0 AC146507.2-201ENST00000460608 476 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 RPS26P15-201ENST00000488067 348 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4DQ86TL0 RNA5SP54-201ENST00000516951 92 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 NACAP3-201ENST00000552100 481 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 GNRHR2P1-201ENST00000555315 631 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 AL161713.1-201ENST00000555538 145 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 MED28P6-201ENST00000558776 231 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4DQ86TL0 LINC00933-203ENST00000559812 219 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 U7.2-201ENST00000607576 63 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 AL354798.1-201ENST00000622505 329 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 AC099654.7-201ENST00000635788 2127 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 MIR3674-201ENST00000636576 68 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 MIR6844-201ENST00000637122 62 ntBASIC3.66□□□□□ -1.82
ATG4DQ86TL0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4DQ86TL0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.65□□□□□ -1.82
ATG4DQ86TL0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
ATG4DQ86TL0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.65□□□□□ -1.82
ATG4DQ86TL0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.65□□□□□ -1.82
ATG4DQ86TL0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ATG4DQ86TL0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.65□□□□□ -1.82
ATG4DQ86TL0 RN7SKP280-201ENST00000364196 304 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 RNU6-1310P-201ENST00000384153 107 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 RNU6-768P-201ENST00000384683 107 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 MIR134-201ENST00000385258 73 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 MT-TT-201ENST00000387460 66 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 RPL21P65-201ENST00000406094 466 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 U3.40-201ENST00000408706 208 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 RNA5SP475-201ENST00000410568 110 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 AL158823.1-201ENST00000418441 478 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 CYCSP49-201ENST00000420810 319 ntBASIC3.65□□□□□ -1.83
ATG4DQ86TL0 BPY2DP-201ENST00000422208 265 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms