Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-1038P-201ENST00000516516 104 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 AL137161.1-201ENST00000532231 390 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.45□□□□□ -2.02
NPHP3Q7Z494 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.45□□□□□ -2.02
NPHP3Q7Z494 MYL12BP1-201ENST00000569826 507 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.45□□□□□ -2.02
NPHP3Q7Z494 MIR502-201ENST00000606349 86 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 AC004492.1-201ENST00000607036 742 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 AC009487.4-201ENST00000624969 3585 ntBASIC2.45□□□□□ -2.02
NPHP3Q7Z494 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
NPHP3Q7Z494 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
NPHP3Q7Z494 RNA5SP125-201ENST00000364843 120 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 SNORD37.1-201ENST00000390968 65 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 RNU6-192P-201ENST00000391253 100 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AL606923.1-201ENST00000406616 190 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 RNU6-1068P-201ENST00000410958 103 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 RNU6-607P-201ENST00000411283 108 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 DYNLL1P5-201ENST00000467158 270 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AC011005.2-201ENST00000487324 359 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AC074344.1-201ENST00000512823 224 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 RNU6-1281P-201ENST00000516223 105 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 RNA5SP82-201ENST00000516707 92 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AL031601.2-202ENST00000622650 282 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AP003400.5-201ENST00000624827 617 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AC068137.3-201ENST00000639191 341 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AC073869.6-201ENST00000640656 341 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 AC027514.1-201ENST00000588561 1603 ntBASIC2.44□□□□□ -2.02
NPHP3Q7Z494 Y_RNA.38-201ENST00000362617 102 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 RNU6-72P-201ENST00000384285 79 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 MIR181A1-201ENST00000385026 110 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 CIR1P3-201ENST00000405137 479 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 MTND3P21-201ENST00000433774 331 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 MTND1P34-201ENST00000438556 671 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 PRPS1P1-201ENST00000445305 876 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.43□□□□□ -2.02
NPHP3Q7Z494 AC080013.2-201ENST00000460866 323 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 RPL36AP48-201ENST00000485521 314 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 RPL22P13-201ENST00000493291 347 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NPHP3Q7Z494 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.43□□□□□ -2.02
NPHP3Q7Z494 Y_RNA.687-201ENST00000516558 91 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.43□□□□□ -2.02
NPHP3Q7Z494 MIR4424-201ENST00000585257 86 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 AC087045.1-201ENST00000605856 382 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 uc_338.34-201ENST00000617467 174 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 MTND4P1-201ENST00000457501 1466 ntBASIC2.43□□□□□ -2.02
NPHP3Q7Z494 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.43□□□□□ -2.02
NPHP3Q7Z494 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 RNU6-392P-201ENST00000364926 101 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 RNU4-12P-201ENST00000365233 139 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 RNU4-20P-201ENST00000365601 151 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 RNU6-434P-201ENST00000384376 107 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 FTH1P15-201ENST00000406984 280 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 U6atac.2-201ENST00000408644 118 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 MIR1276-201ENST00000408707 83 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 RNU6-648P-201ENST00000410190 107 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 MTCO1P20-201ENST00000425366 358 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 HMGB1P31-201ENST00000437242 427 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 CALM1P1-201ENST00000442082 433 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AC079804.2-201ENST00000490376 200 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 HMGB1P30-201ENST00000492455 606 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 LRRC34P2-201ENST00000514850 553 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 SMURF2P1-201ENST00000514992 481 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 RNU1-40P-201ENST00000516816 164 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 RNU1-97P-201ENST00000516872 164 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 RNU1-104P-201ENST00000517280 175 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 IGLV3-17-201ENST00000519099 244 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 MTND4P7-201ENST00000523876 130 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 OR5AQ1P-201ENST00000527596 927 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AL118558.2-201ENST00000556294 238 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AC084782.3-201ENST00000612282 578 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 AC022418.1-201ENST00000624118 445 ntBASIC2.42□□□□□ -2.02
NPHP3Q7Z494 Z75746.1-201ENST00000440243 2080 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms