Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SNORA76.2-201ENST00000517095 137 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC109810.1-201ENST00000534066 224 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC138869.1-201ENST00000568623 124 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AP003465.2-201ENST00000602571 373 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC025449.1-201ENST00000603896 529 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 RNU4-84P-201ENST00000364200 139 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 RNU2-59P-201ENST00000410482 191 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC023442.1-201ENST00000531247 422 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 MIR3681-201ENST00000580089 72 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 MIR520F-201ENST00000384824 87 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC093422.3-201ENST00000428506 305 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 COPS8P3-201ENST00000526024 482 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC117490.2-201ENST00000610042 594 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 MIR888-201ENST00000401186 77 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 HMGB1P28-201ENST00000507778 552 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AL022067.1-201ENST00000602426 454 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AL121992.2-201ENST00000606262 256 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 AC007490.1-201ENST00000624321 703 ntBASIC-0.31□□□□□ -2.46
VPS13DQ5THJ4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 MIR587-201ENST00000384845 96 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 MIR135A2-201ENST00000384854 100 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AL035398.1-201ENST00000430869 322 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 MTND2P21-201ENST00000436242 1042 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 SNORA31.2-201ENST00000516019 134 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AC009268.1-201ENST00000561352 1203 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 MTND1P15-201ENST00000579262 949 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AP002906.1-201ENST00000603405 233 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AL390237.1-201ENST00000404226 1415 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AL589994.1-201ENST00000404962 340 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 RNA5SP56-201ENST00000410277 118 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 RNU6-712P-201ENST00000410558 100 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 MTND2P24-201ENST00000453434 806 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 HMGB1P30-201ENST00000492455 606 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 RNA5SP481-201ENST00000516814 122 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AC069113.3-201ENST00000521019 150 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 LINC02555-201ENST00000563933 1951 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 MIR194-1-201ENST00000384892 85 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 SNORD65-201ENST00000391079 73 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AC016909.1-201ENST00000415916 166 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 RAC1P7-201ENST00000445367 377 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 RPL26P26-201ENST00000480251 434 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AC074344.1-201ENST00000512823 224 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 RNU6-1256P-201ENST00000516539 103 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 SNORD19.2-201ENST00000516978 73 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AL161729.4-201ENST00000604650 476 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 RNU6-91P-201ENST00000607774 107 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 AC006157.1-201ENST00000611750 366 ntBASIC-0.32□□□□□ -2.46
VPS13DQ5THJ4 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 MTATP6P31-201ENST00000406985 692 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC010460.2-201ENST00000509054 677 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC004009.2-201ENST00000623016 728 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 MIR103A2-201ENST00000362154 78 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 RPL22P22-201ENST00000395439 379 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AL592447.1-201ENST00000447592 540 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AL031313.1-201ENST00000448435 256 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AL132657.2-201ENST00000564417 358 ntBASIC-0.33□□□□□ -2.46
VPS13DQ5THJ4 AC136618.2-201ENST00000575091 400 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms