Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM12Q3MHD2 MIR148B-201ENST00000362252 99 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 SNORD9-201ENST00000362566 104 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 SNORD56.3-201ENST00000363507 71 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 Y_RNA.240-201ENST00000364469 95 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 RNU6-326P-201ENST00000365480 107 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 AL033519.2-201ENST00000403958 392 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 RNU4-30P-201ENST00000410245 143 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM12Q3MHD2 AC244098.2-201ENST00000422068 99 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM12Q3MHD2 snoU13.30-201ENST00000458951 104 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 RNU6-377P-201ENST00000515965 102 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.32□□□□□ -1.88
LSM12Q3MHD2 MRPS18CP4-201ENST00000535821 231 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 MIR3160-1-201ENST00000577972 85 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 MIR4782-201ENST00000577987 79 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.32□□□□□ -1.88
LSM12Q3MHD2 MIR7851-201ENST00000610611 160 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 AC099506.2-201ENST00000623074 221 ntBASIC3.32□□□□□ -1.88
LSM12Q3MHD2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
LSM12Q3MHD2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.32□□□□□ -1.88
LSM12Q3MHD2 AC017071.1-201ENST00000564407 2204 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM12Q3MHD2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM12Q3MHD2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LSM12Q3MHD2 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 RNA5SP51-201ENST00000364750 119 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 Y_RNA.398-201ENST00000383952 99 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 RNU6-17P-201ENST00000384245 107 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 RNU6-18P-201ENST00000384527 107 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 RNU6-1135P-201ENST00000411083 103 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.31□□□□□ -1.88
LSM12Q3MHD2 AC016700.2-201ENST00000446011 156 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 HMGN2P16-201ENST00000456802 261 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 snoU109.2-201ENST00000459316 135 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM12Q3MHD2 RPL23AP75-201ENST00000491601 451 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 Y_RNA.662-201ENST00000516028 97 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 RNU2-31P-201ENST00000516954 155 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 SNORA31.19-201ENST00000517079 126 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM12Q3MHD2 SNRPGP15-201ENST00000600149 222 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 AC104465.1-201ENST00000611365 139 ntBASIC3.31□□□□□ -1.88
LSM12Q3MHD2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LSM12Q3MHD2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LSM12Q3MHD2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM12Q3MHD2 BX322639.1-202ENST00000423987 2213 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM12Q3MHD2 Y_RNA.8-201ENST00000362353 102 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 Y_RNA.233-201ENST00000364407 101 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 Y_RNA.275-201ENST00000364726 110 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 RNU6-1081P-201ENST00000384537 107 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 U8.11-201ENST00000384699 133 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 U8.12-201ENST00000384701 133 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 AL035423.1-201ENST00000420331 213 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM12Q3MHD2 CYCSP32-201ENST00000440548 321 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 PIGFP3-201ENST00000441918 722 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 AC009296.1-201ENST00000443146 155 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 AC092798.1-201ENST00000458542 409 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 U8.18-201ENST00000459285 133 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 RN7SKP18-201ENST00000516005 275 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 RNY3P16-201ENST00000516338 101 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 SNORA31.18-201ENST00000517043 134 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM12Q3MHD2 FAM60BP-201ENST00000578364 658 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 MIR4423-201ENST00000580922 80 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 VN1R85P-201ENST00000601587 426 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 AL645944.1-201ENST00000603857 493 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 RPL23AP88-201ENST00000605759 454 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 SNORD113-5-201ENST00000607261 78 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 AC091953.5-201ENST00000622919 233 ntBASIC3.3□□□□□ -1.88
LSM12Q3MHD2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM12Q3MHD2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LSM12Q3MHD2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LSM12Q3MHD2 AC135776.4-201ENST00000624300 1904 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 Y_RNA.245-201ENST00000364493 95 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 RNU4-9P-201ENST00000364951 139 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 Y_RNA.418-201ENST00000384029 102 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 Y_RNA.446-201ENST00000384178 104 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 SNORA53-201ENST00000391141 249 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 RPS4XP3-201ENST00000398541 413 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 TOMM22P1-201ENST00000418578 312 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 VDAC1P3-201ENST00000434069 851 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 RPS20P22-201ENST00000473700 357 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 RPL26P26-201ENST00000480251 434 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 RPL30P1-201ENST00000488676 339 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.29□□□□□ -1.88
LSM12Q3MHD2 SCARNA15.2-201ENST00000516409 127 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 RNU6-1256P-201ENST00000516539 103 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 RNU6-572P-201ENST00000516724 80 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 RN7SKP272-201ENST00000516988 232 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 ATP5F1P5-201ENST00000526403 760 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 AC073476.4-201ENST00000628409 72 ntBASIC3.29□□□□□ -1.88
LSM12Q3MHD2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms