Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 AC012493.2-201ENST00000595083 291 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AC072026.1-201ENST00000605023 201 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.28□□□□□ -1.72
ECM1Q16610 AL391261.4-201ENST00000616012 481 ntBASIC4.28□□□□□ -1.72
ECM1Q16610 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.28□□□□□ -1.72
ECM1Q16610 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.28□□□□□ -1.72
ECM1Q16610 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ECM1Q16610 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.28□□□□□ -1.72
ECM1Q16610 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ECM1Q16610 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.28□□□□□ -1.72
ECM1Q16610 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.28□□□□□ -1.72
ECM1Q16610 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ECM1Q16610 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ECM1Q16610 BX322639.1-202ENST00000423987 2213 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 AF127577.6-201ENST00000623352 2191 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ECM1Q16610 AC106871.1-201ENST00000568324 3102 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ECM1Q16610 Y_RNA.16-201ENST00000362421 102 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 RNU6-1298P-201ENST00000362456 101 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 RNA5SP97-201ENST00000365006 84 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 Y_RNA.304-201ENST00000365011 112 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 SNORA72.2-201ENST00000365028 127 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 RNU6-44P-201ENST00000384045 107 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 Y_RNA.569-201ENST00000384749 103 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 RNU6-750P-201ENST00000390946 107 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 U3.26-201ENST00000391236 204 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.27□□□□□ -1.73
ECM1Q16610 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.27□□□□□ -1.73
ECM1Q16610 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.27□□□□□ -1.73
ECM1Q16610 TRBV12-2-201ENST00000489763 344 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 RPS27P26-201ENST00000494583 239 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 RPL7P47-201ENST00000497299 556 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 SNORA31.1-201ENST00000515993 133 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 SNORA31.5-201ENST00000516190 133 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 UBL5P4-201ENST00000562584 236 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 SNORA62.6-201ENST00000606322 83 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 AL365222.1-201ENST00000614661 98 ntBASIC4.27□□□□□ -1.73
ECM1Q16610 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
ECM1Q16610 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
ECM1Q16610 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ECM1Q16610 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.26□□□□□ -1.73
ECM1Q16610 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ECM1Q16610 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ECM1Q16610 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
ECM1Q16610 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ECM1Q16610 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ECM1Q16610 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.26□□□□□ -1.73
ECM1Q16610 AL079305.1-201ENST00000623159 3008 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ECM1Q16610 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ECM1Q16610 RNA5SP361-201ENST00000362686 118 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 Y_RNA.240-201ENST00000364469 95 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.26□□□□□ -1.73
ECM1Q16610 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
ECM1Q16610 Y_RNA.383-201ENST00000383855 97 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 Y_RNA.398-201ENST00000383952 99 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 MIR208B-201ENST00000401172 77 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 SNORA3.3-201ENST00000408712 125 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 RNA5SP38-201ENST00000410750 119 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 RNU6-1001P-201ENST00000411265 100 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 Y_RNA.626-201ENST00000411288 95 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 AC023141.4-201ENST00000412031 328 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.26□□□□□ -1.73
ECM1Q16610 AC010154.1-201ENST00000425857 269 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 AC007395.1-201ENST00000451333 677 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 Y_RNA.662-201ENST00000516028 97 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 AC005176.2-201ENST00000596933 147 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 RNU1-30P-201ENST00000606575 163 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 MIR4727-201ENST00000622232 55 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 AC006001.4-201ENST00000622243 395 ntBASIC4.26□□□□□ -1.73
ECM1Q16610 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ECM1Q16610 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.26□□□□□ -1.73
ECM1Q16610 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.26□□□□□ -1.73
ECM1Q16610 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ECM1Q16610 SNORA25.1-201ENST00000362326 128 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 RNY4P28-201ENST00000365281 93 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 Y_RNA.353-201ENST00000365440 108 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 Y_RNA.418-201ENST00000384029 102 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 SNORA36A-201ENST00000384221 132 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 U8.11-201ENST00000384699 133 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 U8.12-201ENST00000384701 133 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 RN7SKP27-201ENST00000410684 333 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 RNU6-1135P-201ENST00000411083 103 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 snoU13.6-201ENST00000458785 104 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 U8.18-201ENST00000459285 133 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 COX6CP14-201ENST00000469580 174 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.25□□□□□ -1.73
ECM1Q16610 SNORA40.9-201ENST00000515895 93 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 SNORA31.21-201ENST00000517180 77 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.25□□□□□ -1.73
ECM1Q16610 MRPS18CP4-201ENST00000535821 231 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 MIR5685-201ENST00000579080 79 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 MIR1254-2-201ENST00000579553 63 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.25□□□□□ -1.73
ECM1Q16610 AC012531.5-201ENST00000611375 151 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 uc_338.14-201ENST00000613162 166 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 AC005520.5-201ENST00000613926 164 ntBASIC4.25□□□□□ -1.73
ECM1Q16610 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms