Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 AC093732.2-201ENST00000607950 274 ntBASIC4.47□□□□□ -1.69
LAPTM4AQ15012 MIR376A2-201ENST00000636782 80 ntBASIC4.47□□□□□ -1.69
LAPTM4AQ15012 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LAPTM4AQ15012 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LAPTM4AQ15012 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LAPTM4AQ15012 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LAPTM4AQ15012 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
LAPTM4AQ15012 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LAPTM4AQ15012 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LAPTM4AQ15012 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LAPTM4AQ15012 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LAPTM4AQ15012 Y_RNA.155-201ENST00000363632 101 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 MIR548B-201ENST00000385247 97 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 SNORA11B-201ENST00000408175 129 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 Z75741.1-201ENST00000446793 314 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 SNORD11-201ENST00000459124 84 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 RNU7-164P-201ENST00000459221 62 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 RNA5SP360-201ENST00000516555 118 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 RN7SKP260-201ENST00000516907 149 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 RNU6-709P-201ENST00000517257 104 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 MIR1269B-201ENST00000580405 75 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 ELOCP29-201ENST00000588193 334 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 AC073413.2-201ENST00000604332 360 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 MIR1255B1-201ENST00000636325 63 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 FAM91A3P-201ENST00000456826 2544 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 AC092435.4-201ENST00000623012 4159 ntBASIC4.46□□□□□ -1.7
LAPTM4AQ15012 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LAPTM4AQ15012 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.46□□□□□ -1.7
LAPTM4AQ15012 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LAPTM4AQ15012 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 RNA5SP455-201ENST00000365190 119 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 RNU6-1292P-201ENST00000383856 107 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 MIR223-201ENST00000385204 110 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 U8.17-201ENST00000391292 132 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AL031121.1-201ENST00000406553 254 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AL355796.1-201ENST00000406706 323 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AL365496.1-201ENST00000426885 215 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AL121890.1-201ENST00000435457 205 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AL354710.1-201ENST00000453641 246 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 RN7SL738P-201ENST00000470264 297 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AC105137.1-201ENST00000484355 562 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 NIP7P2-201ENST00000485801 544 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 RN7SL30P-201ENST00000488416 306 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 NDUFA4P2-201ENST00000489989 244 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 RNA5SP43-201ENST00000516559 110 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 SCARNA21.2-201ENST00000516600 166 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 RNA5SP392-201ENST00000516905 112 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 AC074140.1-201ENST00000621617 208 ntBASIC4.45□□□□□ -1.7
LAPTM4AQ15012 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.45□□□□□ -1.7
LAPTM4AQ15012 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LAPTM4AQ15012 AC005332.5-201ENST00000591222 2919 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LAPTM4AQ15012 AC004925.1-201ENST00000624256 2706 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LAPTM4AQ15012 SNORA18-201ENST00000384416 132 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 EI24P2-201ENST00000397776 1076 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 CYP4F29P-201ENST00000420685 446 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 AC079355.1-201ENST00000421770 223 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.44□□□□□ -1.7
LAPTM4AQ15012 AC023449.1-201ENST00000454464 154 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.44□□□□□ -1.7
LAPTM4AQ15012 AC093663.1-201ENST00000497190 394 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 MIR4489-201ENST00000578869 62 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 SNORA74C-1-201ENST00000580726 201 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 MIR5006-201ENST00000583027 110 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 MIR4443-201ENST00000585052 53 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 AC011447.4-201ENST00000587562 111 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 HSPE1P19-201ENST00000603327 295 ntBASIC4.44□□□□□ -1.7
LAPTM4AQ15012 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LAPTM4AQ15012 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LAPTM4AQ15012 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
LAPTM4AQ15012 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LAPTM4AQ15012 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LAPTM4AQ15012 DHX9P1-201ENST00000436565 3076 ntBASIC4.43□□□□□ -1.7
LAPTM4AQ15012 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LAPTM4AQ15012 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
LAPTM4AQ15012 AC073073.2-201ENST00000609827 2578 ntBASIC4.43□□□□□ -1.7
LAPTM4AQ15012 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LAPTM4AQ15012 AC106871.1-201ENST00000568324 3102 ntBASIC4.43□□□□□ -1.7
LAPTM4AQ15012 Y_RNA.205-201ENST00000364128 113 ntBASIC4.43□□□□□ -1.7
LAPTM4AQ15012 SNORD115-27-201ENST00000364430 82 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms